data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db4yyp_10274#A _PB_list.Queried_date 2015-08-28 _PB_list.Input_file_name pdb4yyp.ent _PB_list.Output_file_name bmr26547_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr26547_PB.str _PB_list.AA_seq_one_letter_code SAQLLKSVFVKNVGWATQLTSGAVWVQFNDGSQLVVQAGVSSISYTSPNGQTTRYGENEKLPDYIKQKLQCLSSILLMFSNPTPNFH _PB_list.PB_seq_code zzdfbdcddddfbdcdddfkopacdddfkopacdddehiabdcdddfkopacdddfblccdfklmmmmmmmmmmmmmmpcfbdcezz _PB_list.PDB_ID 4YYP _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.2542 _PB_list.PDBX_refine_ls_R_factor_R_work 0.2174 _PB_list.PDBX_refine_ls_d_res_high 2.60 _PB_list.PDBX_refine_ls_d_res_low 20.80 _PB_list.Entry_ID 26547 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLY . A . . . . 0 26547 1 1 1 1 2 SER . A . 1 SER . 0 26547 1 1 1 1 3 ALA . A . 2 ALA . 0 26547 1 1 1 1 4 GLN . A . 3 GLN d 1 26547 1 1 1 1 5 LEU . A . 4 LEU f 1 26547 1 1 1 1 6 LEU . A . 5 LEU b 1 26547 1 1 1 1 7 LYS . A . 6 LYS d 1 26547 1 1 1 1 8 SER . A . 7 SER c 1 26547 1 1 1 1 9 VAL . A . 8 VAL d 1 26547 1 1 1 1 10 PHE . A . 9 PHE d 1 26547 1 1 1 1 11 VAL . A . 10 VAL d 1 26547 1 1 1 1 12 LYS . A . 11 LYS d 1 26547 1 1 1 1 13 ASN . A . 12 ASN f 1 26547 1 1 1 1 14 VAL . A . 13 VAL b 1 26547 1 1 1 1 15 GLY . A . 14 GLY d 1 26547 1 1 1 1 16 TRP . A . 15 TRP c 1 26547 1 1 1 1 17 ALA . A . 16 ALA d 1 26547 1 1 1 1 18 THR . A . 17 THR d 1 26547 1 1 1 1 19 GLN . A . 18 GLN d 1 26547 1 1 1 1 20 LEU . A . 19 LEU f 1 26547 1 1 1 1 21 THR . A . 20 THR k 1 26547 1 1 1 1 22 SER . A . 21 SER o 1 26547 1 1 1 1 23 GLY . A . 22 GLY p 1 26547 1 1 1 1 24 ALA . A . 23 ALA a 1 26547 1 1 1 1 25 VAL . A . 24 VAL c 1 26547 1 1 1 1 26 TRP . A . 25 TRP d 1 26547 1 1 1 1 27 VAL . A . 26 VAL d 1 26547 1 1 1 1 28 GLN . A . 27 GLN d 1 26547 1 1 1 1 29 PHE . A . 28 PHE f 1 26547 1 1 1 1 30 ASN . A . 29 ASN k 1 26547 1 1 1 1 31 ASP . A . 30 ASP o 1 26547 1 1 1 1 32 GLY . A . 31 GLY p 1 26547 1 1 1 1 33 SER . A . 32 SER a 1 26547 1 1 1 1 34 GLN . A . 33 GLN c 1 26547 1 1 1 1 35 LEU . A . 34 LEU d 1 26547 1 1 1 1 36 VAL . A . 35 VAL d 1 26547 1 1 1 1 37 VAL . A . 36 VAL d 1 26547 1 1 1 1 38 GLN . A . 37 GLN e 1 26547 1 1 1 1 39 ALA . A . 38 ALA h 1 26547 1 1 1 1 40 GLY . A . 39 GLY i 1 26547 1 1 1 1 41 VAL . A . 40 VAL a 1 26547 1 1 1 1 42 SER . A . 41 SER b 1 26547 1 1 1 1 43 SER . A . 42 SER d 1 26547 1 1 1 1 44 ILE . A . 43 ILE c 1 26547 1 1 1 1 45 SER . A . 44 SER d 1 26547 1 1 1 1 46 TYR . A . 45 TYR d 1 26547 1 1 1 1 47 THR . A . 46 THR d 1 26547 1 1 1 1 48 SER . A . 47 SER f 1 26547 1 1 1 1 49 PRO . A . 48 PRO k 1 26547 1 1 1 1 50 ASN . A . 49 ASN o 1 26547 1 1 1 1 51 GLY . A . 50 GLY p 1 26547 1 1 1 1 52 GLN . A . 51 GLN a 1 26547 1 1 1 1 53 THR . A . 52 THR c 1 26547 1 1 1 1 54 THR . A . 53 THR d 1 26547 1 1 1 1 55 ARG . A . 54 ARG d 1 26547 1 1 1 1 56 TYR . A . 55 TYR d 1 26547 1 1 1 1 57 GLY . A . 56 GLY f 1 26547 1 1 1 1 58 GLU . A . 57 GLU b 1 26547 1 1 1 1 59 ASN . A . 58 ASN l 1 26547 1 1 1 1 60 GLU . A . 59 GLU c 1 26547 1 1 1 1 61 LYS . A . 60 LYS c 1 26547 1 1 1 1 62 LEU . A . 61 LEU d 1 26547 1 1 1 1 63 PRO . A . 62 PRO f 1 26547 1 1 1 1 64 ASP . A . 63 ASP k 1 26547 1 1 1 1 65 TYR . A . 64 TYR l 1 26547 1 1 1 1 66 ILE . A . 65 ILE m 1 26547 1 1 1 1 67 LYS . A . 66 LYS m 1 26547 1 1 1 1 68 GLN . A . 67 GLN m 1 26547 1 1 1 1 69 LYS . A . 68 LYS m 1 26547 1 1 1 1 70 LEU . A . 69 LEU m 1 26547 1 1 1 1 71 GLN . A . 70 GLN m 1 26547 1 1 1 1 72 CYS . A . 71 CYS m 1 26547 1 1 1 1 73 LEU . A . 72 LEU m 1 26547 1 1 1 1 74 SER . A . 73 SER m 1 26547 1 1 1 1 75 SER . A . 74 SER m 1 26547 1 1 1 1 76 ILE . A . 75 ILE m 1 26547 1 1 1 1 77 LEU . A . 76 LEU m 1 26547 1 1 1 1 78 LEU . A . 77 LEU m 1 26547 1 1 1 1 79 MET . A . 78 MET m 1 26547 1 1 1 1 80 PHE . A . 79 PHE p 1 26547 1 1 1 1 81 SER . A . 80 SER c 1 26547 1 1 1 1 82 ASN . A . 81 ASN f 1 26547 1 1 1 1 83 PRO . A . 82 PRO b 1 26547 1 1 1 1 84 THR . A . 83 THR d 1 26547 1 1 1 1 85 PRO . A . 84 PRO c 1 26547 1 1 1 1 86 ASN . A . 85 ASN e 1 26547 1 1 1 1 87 PHE . A . 86 PHE . 1 26547 1 1 1 1 88 HIS . A . 87 HIS . 1 26547 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db4yyp_10274#B _PB_list.Queried_date 2015-08-28 _PB_list.Input_file_name pdb4yyp.ent _PB_list.Output_file_name bmr26547_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr26547_PB.str _PB_list.AA_seq_one_letter_code PDAYRFLTEQDRQLRLLQAQIQRLLEAQSLMP _PB_list.PB_seq_code zzklmmmmmmmmmmmmmmmmmmmmmmmmmpzz _PB_list.PDB_ID 4YYP _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.2542 _PB_list.PDBX_refine_ls_R_factor_R_work 0.2174 _PB_list.PDBX_refine_ls_d_res_high 2.60 _PB_list.PDBX_refine_ls_d_res_low 20.80 _PB_list.Entry_ID 26547 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 2 1 2 1 PRO . B . 1 PRO . 1 26547 2 2 1 2 2 ASP . B . 2 ASP . 1 26547 2 2 1 2 3 ALA . B . 3 ALA k 1 26547 2 2 1 2 4 TYR . B . 4 TYR l 1 26547 2 2 1 2 5 ARG . B . 5 ARG m 1 26547 2 2 1 2 6 PHE . B . 6 PHE m 1 26547 2 2 1 2 7 LEU . B . 7 LEU m 1 26547 2 2 1 2 8 THR . B . 8 THR m 1 26547 2 2 1 2 9 GLU . B . 9 GLU m 1 26547 2 2 1 2 10 GLN . B . 10 GLN m 1 26547 2 2 1 2 11 ASP . B . 11 ASP m 1 26547 2 2 1 2 12 ARG . B . 12 ARG m 1 26547 2 2 1 2 13 GLN . B . 13 GLN m 1 26547 2 2 1 2 14 LEU . B . 14 LEU m 1 26547 2 2 1 2 15 ARG . B . 15 ARG m 1 26547 2 2 1 2 16 LEU . B . 16 LEU m 1 26547 2 2 1 2 17 LEU . B . 17 LEU m 1 26547 2 2 1 2 18 GLN . B . 18 GLN m 1 26547 2 2 1 2 19 ALA . B . 19 ALA m 1 26547 2 2 1 2 20 GLN . B . 20 GLN m 1 26547 2 2 1 2 21 ILE . B . 21 ILE m 1 26547 2 2 1 2 22 GLN . B . 22 GLN m 1 26547 2 2 1 2 23 ARG . B . 23 ARG m 1 26547 2 2 1 2 24 LEU . B . 24 LEU m 1 26547 2 2 1 2 25 LEU . B . 25 LEU m 1 26547 2 2 1 2 26 GLU . B . 26 GLU m 1 26547 2 2 1 2 27 ALA . B . 27 ALA m 1 26547 2 2 1 2 28 GLN . B . 28 GLN m 1 26547 2 2 1 2 29 SER . B . 29 SER m 1 26547 2 2 1 2 30 LEU . B . 30 LEU p 1 26547 2 2 1 2 31 MET . B . 31 MET . 1 26547 2 2 1 2 32 PRO . B . 32 PRO . 1 26547 2 stop_ save_