data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1joo_235#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1joo.ent _PB_list.Output_file_name bmr4052_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4052_PB.str _PB_list.AA_seq_one_letter_code ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ _PB_list.PB_seq_code zzkopbdcdddddfbdcblmlccddehhiacddddehiacddfklpmnbpaklmmlmlmmmmmmmmmmmbacddddfbdfbdfkopacddddehhiafklmmmmnopaccdddddfblmkmmmmmmmmmmmmmnopajlmmbfnlnozz _PB_list.PDB_ID 1JOO _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "Distance, hydrogen bond and torsion angle constraints" _PB_list.Entry_ID 4052 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . A . 1 ALA . 1 4052 1 1 1 1 2 THR . A . 2 THR . 1 4052 1 1 1 1 3 SER . A . 3 SER k 1 4052 1 1 1 1 4 THR . A . 4 THR o 1 4052 1 1 1 1 5 LYS . A . 5 LYS p 1 4052 1 1 1 1 6 LYS . A . 6 LYS b 1 4052 1 1 1 1 7 LEU . A . 7 LEU d 1 4052 1 1 1 1 8 HIS . A . 8 HIS c 1 4052 1 1 1 1 9 LYS . A . 9 LYS d 1 4052 1 1 1 1 10 GLU . A . 10 GLU d 1 4052 1 1 1 1 11 PRO . A . 11 PRO d 1 4052 1 1 1 1 12 ALA . A . 12 ALA d 1 4052 1 1 1 1 13 THR . A . 13 THR d 1 4052 1 1 1 1 14 LEU . A . 14 LEU f 1 4052 1 1 1 1 15 ILE . A . 15 ILE b 1 4052 1 1 1 1 16 LYS . A . 16 LYS d 1 4052 1 1 1 1 17 ALA . A . 17 ALA c 1 4052 1 1 1 1 18 ILE . A . 18 ILE b 1 4052 1 1 1 1 19 ASP . A . 19 ASP l 1 4052 1 1 1 1 20 GLY . A . 20 GLY m 1 4052 1 1 1 1 21 ASP . A . 21 ASP l 1 4052 1 1 1 1 22 THR . A . 22 THR c 1 4052 1 1 1 1 23 VAL . A . 23 VAL c 1 4052 1 1 1 1 24 LYS . A . 24 LYS d 1 4052 1 1 1 1 25 LEU . A . 25 LEU d 1 4052 1 1 1 1 26 MET . A . 26 MET e 1 4052 1 1 1 1 27 TYR . A . 27 TYR h 1 4052 1 1 1 1 28 LYS . A . 28 LYS h 1 4052 1 1 1 1 29 GLY . A . 29 GLY i 1 4052 1 1 1 1 30 GLN . A . 30 GLN a 1 4052 1 1 1 1 31 PRO . A . 31 PRO c 1 4052 1 1 1 1 32 MET . A . 32 MET d 1 4052 1 1 1 1 33 THR . A . 33 THR d 1 4052 1 1 1 1 34 PHE . A . 34 PHE d 1 4052 1 1 1 1 35 ARG . A . 35 ARG d 1 4052 1 1 1 1 36 LEU . A . 36 LEU e 1 4052 1 1 1 1 37 LEU . A . 37 LEU h 1 4052 1 1 1 1 38 LEU . A . 38 LEU i 1 4052 1 1 1 1 39 VAL . A . 39 VAL a 1 4052 1 1 1 1 40 ASP . A . 40 ASP c 1 4052 1 1 1 1 41 THR . A . 41 THR d 1 4052 1 1 1 1 42 PRO . A . 42 PRO d 1 4052 1 1 1 1 43 GLU . A . 43 GLU f 1 4052 1 1 1 1 44 THR . A . 44 THR k 1 4052 1 1 1 1 45 LYS . A . 45 LYS l 1 4052 1 1 1 1 46 HIS . A . 46 HIS p 1 4052 1 1 1 1 47 PRO . A . 47 PRO m 1 4052 1 1 1 1 48 LYS . A . 48 LYS n 1 4052 1 1 1 1 49 LYS . A . 49 LYS b 1 4052 1 1 1 1 50 GLY . A . 50 GLY p 1 4052 1 1 1 1 51 VAL . A . 51 VAL a 1 4052 1 1 1 1 52 GLU . A . 52 GLU k 1 4052 1 1 1 1 53 LYS . A . 53 LYS l 1 4052 1 1 1 1 54 TYR . A . 54 TYR m 1 4052 1 1 1 1 55 GLY . A . 55 GLY m 1 4052 1 1 1 1 56 PRO . A . 56 PRO l 1 4052 1 1 1 1 57 GLU . A . 57 GLU m 1 4052 1 1 1 1 58 ALA . A . 58 ALA l 1 4052 1 1 1 1 59 SER . A . 59 SER m 1 4052 1 1 1 1 60 ALA . A . 60 ALA m 1 4052 1 1 1 1 61 PHE . A . 61 PHE m 1 4052 1 1 1 1 62 THR . A . 62 THR m 1 4052 1 1 1 1 63 LYS . A . 63 LYS m 1 4052 1 1 1 1 64 LYS . A . 64 LYS m 1 4052 1 1 1 1 65 MET . A . 65 MET m 1 4052 1 1 1 1 66 VAL . A . 66 VAL m 1 4052 1 1 1 1 67 GLU . A . 67 GLU m 1 4052 1 1 1 1 68 ASN . A . 68 ASN m 1 4052 1 1 1 1 69 ALA . A . 69 ALA m 1 4052 1 1 1 1 70 LYS . A . 70 LYS b 1 4052 1 1 1 1 71 LYS . A . 71 LYS a 1 4052 1 1 1 1 72 ILE . A . 72 ILE c 1 4052 1 1 1 1 73 GLU . A . 73 GLU d 1 4052 1 1 1 1 74 VAL . A . 74 VAL d 1 4052 1 1 1 1 75 GLU . A . 75 GLU d 1 4052 1 1 1 1 76 PHE . A . 76 PHE d 1 4052 1 1 1 1 77 ASP . A . 77 ASP f 1 4052 1 1 1 1 78 LYS . A . 78 LYS b 1 4052 1 1 1 1 79 GLY . A . 79 GLY d 1 4052 1 1 1 1 80 GLN . A . 80 GLN f 1 4052 1 1 1 1 81 ARG . A . 81 ARG b 1 4052 1 1 1 1 82 THR . A . 82 THR d 1 4052 1 1 1 1 83 ASP . A . 83 ASP f 1 4052 1 1 1 1 84 LYS . A . 84 LYS k 1 4052 1 1 1 1 85 TYR . A . 85 TYR o 1 4052 1 1 1 1 86 GLY . A . 86 GLY p 1 4052 1 1 1 1 87 ARG . A . 87 ARG a 1 4052 1 1 1 1 88 GLY . A . 88 GLY c 1 4052 1 1 1 1 89 LEU . A . 89 LEU d 1 4052 1 1 1 1 90 ALA . A . 90 ALA d 1 4052 1 1 1 1 91 TYR . A . 91 TYR d 1 4052 1 1 1 1 92 ILE . A . 92 ILE d 1 4052 1 1 1 1 93 TYR . A . 93 TYR e 1 4052 1 1 1 1 94 ALA . A . 94 ALA h 1 4052 1 1 1 1 95 ASP . A . 95 ASP h 1 4052 1 1 1 1 96 GLY . A . 96 GLY i 1 4052 1 1 1 1 97 LYS . A . 97 LYS a 1 4052 1 1 1 1 98 MET . A . 98 MET f 1 4052 1 1 1 1 99 VAL . A . 99 VAL k 1 4052 1 1 1 1 100 ASN . A . 100 ASN l 1 4052 1 1 1 1 101 GLU . A . 101 GLU m 1 4052 1 1 1 1 102 ALA . A . 102 ALA m 1 4052 1 1 1 1 103 LEU . A . 103 LEU m 1 4052 1 1 1 1 104 VAL . A . 104 VAL m 1 4052 1 1 1 1 105 ARG . A . 105 ARG n 1 4052 1 1 1 1 106 GLN . A . 106 GLN o 1 4052 1 1 1 1 107 GLY . A . 107 GLY p 1 4052 1 1 1 1 108 LEU . A . 108 LEU a 1 4052 1 1 1 1 109 ALA . A . 109 ALA c 1 4052 1 1 1 1 110 LYS . A . 110 LYS c 1 4052 1 1 1 1 111 VAL . A . 111 VAL d 1 4052 1 1 1 1 112 ALA . A . 112 ALA d 1 4052 1 1 1 1 113 TYR . A . 113 TYR d 1 4052 1 1 1 1 114 VAL . A . 114 VAL d 1 4052 1 1 1 1 115 TYR . A . 115 TYR d 1 4052 1 1 1 1 116 LYS . A . 116 LYS f 1 4052 1 1 1 1 117 PRO . A . 117 PRO b 1 4052 1 1 1 1 118 ASN . A . 118 ASN l 1 4052 1 1 1 1 119 ASN . A . 119 ASN m 1 4052 1 1 1 1 120 THR . A . 120 THR k 1 4052 1 1 1 1 121 HIS . A . 121 HIS m 1 4052 1 1 1 1 122 GLU . A . 122 GLU m 1 4052 1 1 1 1 123 GLN . A . 123 GLN m 1 4052 1 1 1 1 124 LEU . A . 124 LEU m 1 4052 1 1 1 1 125 LEU . A . 125 LEU m 1 4052 1 1 1 1 126 ARG . A . 126 ARG m 1 4052 1 1 1 1 127 LYS . A . 127 LYS m 1 4052 1 1 1 1 128 SER . A . 128 SER m 1 4052 1 1 1 1 129 GLU . A . 129 GLU m 1 4052 1 1 1 1 130 ALA . A . 130 ALA m 1 4052 1 1 1 1 131 GLN . A . 131 GLN m 1 4052 1 1 1 1 132 ALA . A . 132 ALA m 1 4052 1 1 1 1 133 LYS . A . 133 LYS m 1 4052 1 1 1 1 134 LYS . A . 134 LYS n 1 4052 1 1 1 1 135 GLU . A . 135 GLU o 1 4052 1 1 1 1 136 LYS . A . 136 LYS p 1 4052 1 1 1 1 137 LEU . A . 137 LEU a 1 4052 1 1 1 1 138 ASN . A . 138 ASN j 1 4052 1 1 1 1 139 ILE . A . 139 ILE l 1 4052 1 1 1 1 140 TRP . A . 140 TRP m 1 4052 1 1 1 1 141 SER . A . 141 SER m 1 4052 1 1 1 1 142 GLU . A . 142 GLU b 1 4052 1 1 1 1 143 ASP . A . 143 ASP f 1 4052 1 1 1 1 144 ASN . A . 144 ASN n 1 4052 1 1 1 1 145 ALA . A . 145 ALA l 1 4052 1 1 1 1 146 ASP . A . 146 ASP n 1 4052 1 1 1 1 147 SER . A . 147 SER o 1 4052 1 1 1 1 148 GLY . A . 148 GLY . 1 4052 1 1 1 1 149 GLN . A . 149 GLN . 1 4052 1 stop_ save_