data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1dbd_10603#A _PB_list.Queried_date 2016-05-02 _PB_list.Input_file_name pdb1dbd.ent _PB_list.Output_file_name bmr4087_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4087_PB.str _PB_list.AA_seq_one_letter_code RRTTNDGFHLLKAGGSCFALISGTANQVKCYRFRVKKNHRHRYENCTTTWFTVADNGAERQGQAQILITFGSPSQRQDFLKHVPLPPGMNISGFTASLDF _PB_list.PB_seq_code zzmcddddfklpgciacddddbdfklmmmmmmmmmmmmmmmpfbdcdddddddfklmcdcfbdcdddddfblklmmmmmmmmccdehiacdddddddfzz _PB_list.PDB_ID 1DBD _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "DG/SA" _PB_list.Entry_ID 4087 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . A . . . . 0 4087 1 1 1 1 2 PRO . A . . . . 0 4087 1 1 1 1 3 ARG . A . 1 ARG . 0 4087 1 1 1 1 4 ARG . A . 2 ARG . 0 4087 1 1 1 1 5 THR . A . 3 THR m 1 4087 1 1 1 1 6 THR . A . 4 THR c 1 4087 1 1 1 1 7 ASN . A . 5 ASN d 1 4087 1 1 1 1 8 ASP . A . 6 ASP d 1 4087 1 1 1 1 9 GLY . A . 7 GLY d 1 4087 1 1 1 1 10 PHE . A . 8 PHE d 1 4087 1 1 1 1 11 HIS . A . 9 HIS f 1 4087 1 1 1 1 12 LEU . A . 10 LEU k 1 4087 1 1 1 1 13 LEU . A . 11 LEU l 1 4087 1 1 1 1 14 LYS . A . 12 LYS p 1 4087 1 1 1 1 15 ALA . A . 13 ALA g 1 4087 1 1 1 1 16 GLY . A . 14 GLY c 1 4087 1 1 1 1 17 GLY . A . 15 GLY i 1 4087 1 1 1 1 18 SER . A . 16 SER a 1 4087 1 1 1 1 19 CYS . A . 17 CYS c 1 4087 1 1 1 1 20 PHE . A . 18 PHE d 1 4087 1 1 1 1 21 ALA . A . 19 ALA d 1 4087 1 1 1 1 22 LEU . A . 20 LEU d 1 4087 1 1 1 1 23 ILE . A . 21 ILE d 1 4087 1 1 1 1 24 SER . A . 22 SER b 1 4087 1 1 1 1 25 GLY . A . 23 GLY d 1 4087 1 1 1 1 26 THR . A . 24 THR f 1 4087 1 1 1 1 27 ALA . A . 25 ALA k 1 4087 1 1 1 1 28 ASN . A . 26 ASN l 1 4087 1 1 1 1 29 GLN . A . 27 GLN m 1 4087 1 1 1 1 30 VAL . A . 28 VAL m 1 4087 1 1 1 1 31 LYS . A . 29 LYS m 1 4087 1 1 1 1 32 CYS . A . 30 CYS m 1 4087 1 1 1 1 33 TYR . A . 31 TYR m 1 4087 1 1 1 1 34 ARG . A . 32 ARG m 1 4087 1 1 1 1 35 PHE . A . 33 PHE m 1 4087 1 1 1 1 36 ARG . A . 34 ARG m 1 4087 1 1 1 1 37 VAL . A . 35 VAL m 1 4087 1 1 1 1 38 LYS . A . 36 LYS m 1 4087 1 1 1 1 39 LYS . A . 37 LYS m 1 4087 1 1 1 1 40 ASN . A . 38 ASN m 1 4087 1 1 1 1 41 HIS . A . 39 HIS m 1 4087 1 1 1 1 42 ARG . A . 40 ARG m 1 4087 1 1 1 1 43 HIS . A . 41 HIS m 1 4087 1 1 1 1 44 ARG . A . 42 ARG p 1 4087 1 1 1 1 45 TYR . A . 43 TYR f 1 4087 1 1 1 1 46 GLU . A . 44 GLU b 1 4087 1 1 1 1 47 ASN . A . 45 ASN d 1 4087 1 1 1 1 48 CYS . A . 46 CYS c 1 4087 1 1 1 1 49 THR . A . 47 THR d 1 4087 1 1 1 1 50 THR . A . 48 THR d 1 4087 1 1 1 1 51 THR . A . 49 THR d 1 4087 1 1 1 1 52 TRP . A . 50 TRP d 1 4087 1 1 1 1 53 PHE . A . 51 PHE d 1 4087 1 1 1 1 54 THR . A . 52 THR d 1 4087 1 1 1 1 55 VAL . A . 53 VAL d 1 4087 1 1 1 1 56 ALA . A . 54 ALA f 1 4087 1 1 1 1 57 ASP . A . 55 ASP k 1 4087 1 1 1 1 58 ASN . A . 56 ASN l 1 4087 1 1 1 1 59 GLY . A . 57 GLY m 1 4087 1 1 1 1 60 ALA . A . 58 ALA c 1 4087 1 1 1 1 61 GLU . A . 59 GLU d 1 4087 1 1 1 1 62 ARG . A . 60 ARG c 1 4087 1 1 1 1 63 GLN . A . 61 GLN f 1 4087 1 1 1 1 64 GLY . A . 62 GLY b 1 4087 1 1 1 1 65 GLN . A . 63 GLN d 1 4087 1 1 1 1 66 ALA . A . 64 ALA c 1 4087 1 1 1 1 67 GLN . A . 65 GLN d 1 4087 1 1 1 1 68 ILE . A . 66 ILE d 1 4087 1 1 1 1 69 LEU . A . 67 LEU d 1 4087 1 1 1 1 70 ILE . A . 68 ILE d 1 4087 1 1 1 1 71 THR . A . 69 THR d 1 4087 1 1 1 1 72 PHE . A . 70 PHE f 1 4087 1 1 1 1 73 GLY . A . 71 GLY b 1 4087 1 1 1 1 74 SER . A . 72 SER l 1 4087 1 1 1 1 75 PRO . A . 73 PRO k 1 4087 1 1 1 1 76 SER . A . 74 SER l 1 4087 1 1 1 1 77 GLN . A . 75 GLN m 1 4087 1 1 1 1 78 ARG . A . 76 ARG m 1 4087 1 1 1 1 79 GLN . A . 77 GLN m 1 4087 1 1 1 1 80 ASP . A . 78 ASP m 1 4087 1 1 1 1 81 PHE . A . 79 PHE m 1 4087 1 1 1 1 82 LEU . A . 80 LEU m 1 4087 1 1 1 1 83 LYS . A . 81 LYS m 1 4087 1 1 1 1 84 HIS . A . 82 HIS m 1 4087 1 1 1 1 85 VAL . A . 83 VAL c 1 4087 1 1 1 1 86 PRO . A . 84 PRO c 1 4087 1 1 1 1 87 LEU . A . 85 LEU d 1 4087 1 1 1 1 88 PRO . A . 86 PRO e 1 4087 1 1 1 1 89 PRO . A . 87 PRO h 1 4087 1 1 1 1 90 GLY . A . 88 GLY i 1 4087 1 1 1 1 91 MET . A . 89 MET a 1 4087 1 1 1 1 92 ASN . A . 90 ASN c 1 4087 1 1 1 1 93 ILE . A . 91 ILE d 1 4087 1 1 1 1 94 SER . A . 92 SER d 1 4087 1 1 1 1 95 GLY . A . 93 GLY d 1 4087 1 1 1 1 96 PHE . A . 94 PHE d 1 4087 1 1 1 1 97 THR . A . 95 THR d 1 4087 1 1 1 1 98 ALA . A . 96 ALA d 1 4087 1 1 1 1 99 SER . A . 97 SER d 1 4087 1 1 1 1 100 LEU . A . 98 LEU f 1 4087 1 1 1 1 101 ASP . A . 99 ASP . 1 4087 1 1 1 1 102 PHE . A . 100 PHE . 1 4087 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1dbd_10603#B _PB_list.Queried_date 2016-05-02 _PB_list.Input_file_name pdb1dbd.ent _PB_list.Output_file_name bmr4087_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4087_PB.str _PB_list.AA_seq_one_letter_code RRTTNDGFHLLKAGGSCFALISGTANQVKCYRFRVKKNHRHRYENCTTTWFTVADNGAERQGQAQILITFGSPSQRQDFLKHVPLPPGMNISGFTASLDF _PB_list.PB_seq_code zzmcbdcbfklpgciacddddbdfklmmmmmmmmmmmmmmmpfbdcdddddddfklccdcfbdcdddddfblklmmmmmmmmccdehiacdddddddfzz _PB_list.PDB_ID 1DBD _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "DG/SA" _PB_list.Entry_ID 4087 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . B . . . . 0 4087 2 1 1 1 2 PRO . B . . . . 0 4087 2 1 1 1 3 ARG . B . 1 ARG . 0 4087 2 1 1 1 4 ARG . B . 2 ARG . 0 4087 2 1 1 1 5 THR . B . 3 THR m 1 4087 2 1 1 1 6 THR . B . 4 THR c 1 4087 2 1 1 1 7 ASN . B . 5 ASN b 1 4087 2 1 1 1 8 ASP . B . 6 ASP d 1 4087 2 1 1 1 9 GLY . B . 7 GLY c 1 4087 2 1 1 1 10 PHE . B . 8 PHE b 1 4087 2 1 1 1 11 HIS . B . 9 HIS f 1 4087 2 1 1 1 12 LEU . B . 10 LEU k 1 4087 2 1 1 1 13 LEU . B . 11 LEU l 1 4087 2 1 1 1 14 LYS . B . 12 LYS p 1 4087 2 1 1 1 15 ALA . B . 13 ALA g 1 4087 2 1 1 1 16 GLY . B . 14 GLY c 1 4087 2 1 1 1 17 GLY . B . 15 GLY i 1 4087 2 1 1 1 18 SER . B . 16 SER a 1 4087 2 1 1 1 19 CYS . B . 17 CYS c 1 4087 2 1 1 1 20 PHE . B . 18 PHE d 1 4087 2 1 1 1 21 ALA . B . 19 ALA d 1 4087 2 1 1 1 22 LEU . B . 20 LEU d 1 4087 2 1 1 1 23 ILE . B . 21 ILE d 1 4087 2 1 1 1 24 SER . B . 22 SER b 1 4087 2 1 1 1 25 GLY . B . 23 GLY d 1 4087 2 1 1 1 26 THR . B . 24 THR f 1 4087 2 1 1 1 27 ALA . B . 25 ALA k 1 4087 2 1 1 1 28 ASN . B . 26 ASN l 1 4087 2 1 1 1 29 GLN . B . 27 GLN m 1 4087 2 1 1 1 30 VAL . B . 28 VAL m 1 4087 2 1 1 1 31 LYS . B . 29 LYS m 1 4087 2 1 1 1 32 CYS . B . 30 CYS m 1 4087 2 1 1 1 33 TYR . B . 31 TYR m 1 4087 2 1 1 1 34 ARG . B . 32 ARG m 1 4087 2 1 1 1 35 PHE . B . 33 PHE m 1 4087 2 1 1 1 36 ARG . B . 34 ARG m 1 4087 2 1 1 1 37 VAL . B . 35 VAL m 1 4087 2 1 1 1 38 LYS . B . 36 LYS m 1 4087 2 1 1 1 39 LYS . B . 37 LYS m 1 4087 2 1 1 1 40 ASN . B . 38 ASN m 1 4087 2 1 1 1 41 HIS . B . 39 HIS m 1 4087 2 1 1 1 42 ARG . B . 40 ARG m 1 4087 2 1 1 1 43 HIS . B . 41 HIS m 1 4087 2 1 1 1 44 ARG . B . 42 ARG p 1 4087 2 1 1 1 45 TYR . B . 43 TYR f 1 4087 2 1 1 1 46 GLU . B . 44 GLU b 1 4087 2 1 1 1 47 ASN . B . 45 ASN d 1 4087 2 1 1 1 48 CYS . B . 46 CYS c 1 4087 2 1 1 1 49 THR . B . 47 THR d 1 4087 2 1 1 1 50 THR . B . 48 THR d 1 4087 2 1 1 1 51 THR . B . 49 THR d 1 4087 2 1 1 1 52 TRP . B . 50 TRP d 1 4087 2 1 1 1 53 PHE . B . 51 PHE d 1 4087 2 1 1 1 54 THR . B . 52 THR d 1 4087 2 1 1 1 55 VAL . B . 53 VAL d 1 4087 2 1 1 1 56 ALA . B . 54 ALA f 1 4087 2 1 1 1 57 ASP . B . 55 ASP k 1 4087 2 1 1 1 58 ASN . B . 56 ASN l 1 4087 2 1 1 1 59 GLY . B . 57 GLY c 1 4087 2 1 1 1 60 ALA . B . 58 ALA c 1 4087 2 1 1 1 61 GLU . B . 59 GLU d 1 4087 2 1 1 1 62 ARG . B . 60 ARG c 1 4087 2 1 1 1 63 GLN . B . 61 GLN f 1 4087 2 1 1 1 64 GLY . B . 62 GLY b 1 4087 2 1 1 1 65 GLN . B . 63 GLN d 1 4087 2 1 1 1 66 ALA . B . 64 ALA c 1 4087 2 1 1 1 67 GLN . B . 65 GLN d 1 4087 2 1 1 1 68 ILE . B . 66 ILE d 1 4087 2 1 1 1 69 LEU . B . 67 LEU d 1 4087 2 1 1 1 70 ILE . B . 68 ILE d 1 4087 2 1 1 1 71 THR . B . 69 THR d 1 4087 2 1 1 1 72 PHE . B . 70 PHE f 1 4087 2 1 1 1 73 GLY . B . 71 GLY b 1 4087 2 1 1 1 74 SER . B . 72 SER l 1 4087 2 1 1 1 75 PRO . B . 73 PRO k 1 4087 2 1 1 1 76 SER . B . 74 SER l 1 4087 2 1 1 1 77 GLN . B . 75 GLN m 1 4087 2 1 1 1 78 ARG . B . 76 ARG m 1 4087 2 1 1 1 79 GLN . B . 77 GLN m 1 4087 2 1 1 1 80 ASP . B . 78 ASP m 1 4087 2 1 1 1 81 PHE . B . 79 PHE m 1 4087 2 1 1 1 82 LEU . B . 80 LEU m 1 4087 2 1 1 1 83 LYS . B . 81 LYS m 1 4087 2 1 1 1 84 HIS . B . 82 HIS m 1 4087 2 1 1 1 85 VAL . B . 83 VAL c 1 4087 2 1 1 1 86 PRO . B . 84 PRO c 1 4087 2 1 1 1 87 LEU . B . 85 LEU d 1 4087 2 1 1 1 88 PRO . B . 86 PRO e 1 4087 2 1 1 1 89 PRO . B . 87 PRO h 1 4087 2 1 1 1 90 GLY . B . 88 GLY i 1 4087 2 1 1 1 91 MET . B . 89 MET a 1 4087 2 1 1 1 92 ASN . B . 90 ASN c 1 4087 2 1 1 1 93 ILE . B . 91 ILE d 1 4087 2 1 1 1 94 SER . B . 92 SER d 1 4087 2 1 1 1 95 GLY . B . 93 GLY d 1 4087 2 1 1 1 96 PHE . B . 94 PHE d 1 4087 2 1 1 1 97 THR . B . 95 THR d 1 4087 2 1 1 1 98 ALA . B . 96 ALA d 1 4087 2 1 1 1 99 SER . B . 97 SER d 1 4087 2 1 1 1 100 LEU . B . 98 LEU f 1 4087 2 1 1 1 101 ASP . B . 99 ASP . 1 4087 2 1 1 1 102 PHE . B . 100 PHE . 1 4087 2 stop_ save_