data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1n3j_917#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1n3j.ent _PB_list.Output_file_name bmr5567_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5567_PB.str _PB_list.AA_seq_one_letter_code MFNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSRKNMSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLSRPRLTQN _PB_list.PB_seq_code zzfkbccdfbgghiacddddddddehiacdddddccdddfklmmmmoccdcdehjaccddehjlmmmmmpcbafbacdddfklmidddcdfbdcehiaacdehehjopadehpadehzz _PB_list.PDB_ID 1N3J _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "distance geometry simulated annealing molecular dynamics" _PB_list.Entry_ID 5567 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . A . 1 MET . 1 5567 1 1 1 1 2 PHE . A . 2 PHE . 1 5567 1 1 1 1 3 ASN . A . 3 ASN f 1 5567 1 1 1 1 4 ASP . A . 4 ASP k 1 5567 1 1 1 1 5 ARG . A . 5 ARG b 1 5567 1 1 1 1 6 VAL . A . 6 VAL c 1 5567 1 1 1 1 7 ILE . A . 7 ILE c 1 5567 1 1 1 1 8 VAL . A . 8 VAL d 1 5567 1 1 1 1 9 LYS . A . 9 LYS f 1 5567 1 1 1 1 10 LYS . A . 10 LYS b 1 5567 1 1 1 1 11 SER . A . 11 SER g 1 5567 1 1 1 1 12 PRO . A . 12 PRO g 1 5567 1 1 1 1 13 LEU . A . 13 LEU h 1 5567 1 1 1 1 14 GLY . A . 14 GLY i 1 5567 1 1 1 1 15 GLY . A . 15 GLY a 1 5567 1 1 1 1 16 TYR . A . 16 TYR c 1 5567 1 1 1 1 17 GLY . A . 17 GLY d 1 5567 1 1 1 1 18 VAL . A . 18 VAL d 1 5567 1 1 1 1 19 PHE . A . 19 PHE d 1 5567 1 1 1 1 20 ALA . A . 20 ALA d 1 5567 1 1 1 1 21 ARG . A . 21 ARG d 1 5567 1 1 1 1 22 LYS . A . 22 LYS d 1 5567 1 1 1 1 23 SER . A . 23 SER d 1 5567 1 1 1 1 24 PHE . A . 24 PHE d 1 5567 1 1 1 1 25 GLU . A . 25 GLU e 1 5567 1 1 1 1 26 LYS . A . 26 LYS h 1 5567 1 1 1 1 27 GLY . A . 27 GLY i 1 5567 1 1 1 1 28 GLU . A . 28 GLU a 1 5567 1 1 1 1 29 LEU . A . 29 LEU c 1 5567 1 1 1 1 30 VAL . A . 30 VAL d 1 5567 1 1 1 1 31 GLU . A . 31 GLU d 1 5567 1 1 1 1 32 GLU . A . 32 GLU d 1 5567 1 1 1 1 33 CYS . A . 33 CYS d 1 5567 1 1 1 1 34 LEU . A . 34 LEU d 1 5567 1 1 1 1 35 CYS . A . 35 CYS c 1 5567 1 1 1 1 36 ILE . A . 36 ILE c 1 5567 1 1 1 1 37 VAL . A . 37 VAL d 1 5567 1 1 1 1 38 ARG . A . 38 ARG d 1 5567 1 1 1 1 39 HIS . A . 39 HIS d 1 5567 1 1 1 1 40 ASN . A . 40 ASN f 1 5567 1 1 1 1 41 ASP . A . 41 ASP k 1 5567 1 1 1 1 42 ASP . A . 42 ASP l 1 5567 1 1 1 1 43 TRP . A . 43 TRP m 1 5567 1 1 1 1 44 GLY . A . 44 GLY m 1 5567 1 1 1 1 45 THR . A . 45 THR m 1 5567 1 1 1 1 46 ALA . A . 46 ALA m 1 5567 1 1 1 1 47 LEU . A . 47 LEU o 1 5567 1 1 1 1 48 GLU . A . 48 GLU c 1 5567 1 1 1 1 49 ASP . A . 49 ASP c 1 5567 1 1 1 1 50 TYR . A . 50 TYR d 1 5567 1 1 1 1 51 LEU . A . 51 LEU c 1 5567 1 1 1 1 52 PHE . A . 52 PHE d 1 5567 1 1 1 1 53 SER . A . 53 SER e 1 5567 1 1 1 1 54 ARG . A . 54 ARG h 1 5567 1 1 1 1 55 LYS . A . 55 LYS j 1 5567 1 1 1 1 56 ASN . A . 56 ASN a 1 5567 1 1 1 1 57 MET . A . 57 MET c 1 5567 1 1 1 1 58 SER . A . 58 SER c 1 5567 1 1 1 1 59 ALA . A . 59 ALA d 1 5567 1 1 1 1 60 MET . A . 60 MET d 1 5567 1 1 1 1 61 ALA . A . 61 ALA e 1 5567 1 1 1 1 62 LEU . A . 62 LEU h 1 5567 1 1 1 1 63 GLY . A . 63 GLY j 1 5567 1 1 1 1 64 PHE . A . 64 PHE l 1 5567 1 1 1 1 65 GLY . A . 65 GLY m 1 5567 1 1 1 1 66 ALA . A . 66 ALA m 1 5567 1 1 1 1 67 ILE . A . 67 ILE m 1 5567 1 1 1 1 68 PHE . A . 68 PHE m 1 5567 1 1 1 1 69 ASN . A . 69 ASN m 1 5567 1 1 1 1 70 HIS . A . 70 HIS p 1 5567 1 1 1 1 71 SER . A . 71 SER c 1 5567 1 1 1 1 72 LYS . A . 72 LYS b 1 5567 1 1 1 1 73 ASP . A . 73 ASP a 1 5567 1 1 1 1 74 PRO . A . 74 PRO f 1 5567 1 1 1 1 75 ASN . A . 75 ASN b 1 5567 1 1 1 1 76 ALA . A . 76 ALA a 1 5567 1 1 1 1 77 ARG . A . 77 ARG c 1 5567 1 1 1 1 78 HIS . A . 78 HIS d 1 5567 1 1 1 1 79 GLU . A . 79 GLU d 1 5567 1 1 1 1 80 LEU . A . 80 LEU d 1 5567 1 1 1 1 81 THR . A . 81 THR f 1 5567 1 1 1 1 82 ALA . A . 82 ALA k 1 5567 1 1 1 1 83 GLY . A . 83 GLY l 1 5567 1 1 1 1 84 LEU . A . 84 LEU m 1 5567 1 1 1 1 85 LYS . A . 85 LYS i 1 5567 1 1 1 1 86 ARG . A . 86 ARG d 1 5567 1 1 1 1 87 MET . A . 87 MET d 1 5567 1 1 1 1 88 ARG . A . 88 ARG d 1 5567 1 1 1 1 89 ILE . A . 89 ILE c 1 5567 1 1 1 1 90 PHE . A . 90 PHE d 1 5567 1 1 1 1 91 THR . A . 91 THR f 1 5567 1 1 1 1 92 ILE . A . 92 ILE b 1 5567 1 1 1 1 93 LYS . A . 93 LYS d 1 5567 1 1 1 1 94 PRO . A . 94 PRO c 1 5567 1 1 1 1 95 ILE . A . 95 ILE e 1 5567 1 1 1 1 96 ALA . A . 96 ALA h 1 5567 1 1 1 1 97 ILE . A . 97 ILE i 1 5567 1 1 1 1 98 GLY . A . 98 GLY a 1 5567 1 1 1 1 99 GLU . A . 99 GLU a 1 5567 1 1 1 1 100 GLU . A . 100 GLU c 1 5567 1 1 1 1 101 ILE . A . 101 ILE d 1 5567 1 1 1 1 102 THR . A . 102 THR e 1 5567 1 1 1 1 103 ILE . A . 103 ILE h 1 5567 1 1 1 1 104 SER . A . 104 SER e 1 5567 1 1 1 1 105 TYR . A . 105 TYR h 1 5567 1 1 1 1 106 GLY . A . 106 GLY j 1 5567 1 1 1 1 107 ASP . A . 107 ASP o 1 5567 1 1 1 1 108 ASP . A . 108 ASP p 1 5567 1 1 1 1 109 TYR . A . 109 TYR a 1 5567 1 1 1 1 110 TRP . A . 110 TRP d 1 5567 1 1 1 1 111 LEU . A . 111 LEU e 1 5567 1 1 1 1 112 SER . A . 112 SER h 1 5567 1 1 1 1 113 ARG . A . 113 ARG p 1 5567 1 1 1 1 114 PRO . A . 114 PRO a 1 5567 1 1 1 1 115 ARG . A . 115 ARG d 1 5567 1 1 1 1 116 LEU . A . 116 LEU e 1 5567 1 1 1 1 117 THR . A . 117 THR h 1 5567 1 1 1 1 118 GLN . A . 118 GLN . 1 5567 1 1 1 1 119 ASN . A . 119 ASN . 1 5567 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1n3j_917#B _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1n3j.ent _PB_list.Output_file_name bmr5567_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5567_PB.str _PB_list.AA_seq_one_letter_code MFNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSRKNMSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLSRPRLTQN _PB_list.PB_seq_code zzfkbccdfbgghiacddddddddehiacdddddccdddfklmmmmoccdcdehjaccddehjlmmmmmpcbafbacdddfklmidddcdfbdcehiaacdehehjopadehpadehzz _PB_list.PDB_ID 1N3J _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "distance geometry simulated annealing molecular dynamics" _PB_list.Entry_ID 5567 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . B . 1 MET . 1 5567 2 1 1 1 2 PHE . B . 2 PHE . 1 5567 2 1 1 1 3 ASN . B . 3 ASN f 1 5567 2 1 1 1 4 ASP . B . 4 ASP k 1 5567 2 1 1 1 5 ARG . B . 5 ARG b 1 5567 2 1 1 1 6 VAL . B . 6 VAL c 1 5567 2 1 1 1 7 ILE . B . 7 ILE c 1 5567 2 1 1 1 8 VAL . B . 8 VAL d 1 5567 2 1 1 1 9 LYS . B . 9 LYS f 1 5567 2 1 1 1 10 LYS . B . 10 LYS b 1 5567 2 1 1 1 11 SER . B . 11 SER g 1 5567 2 1 1 1 12 PRO . B . 12 PRO g 1 5567 2 1 1 1 13 LEU . B . 13 LEU h 1 5567 2 1 1 1 14 GLY . B . 14 GLY i 1 5567 2 1 1 1 15 GLY . B . 15 GLY a 1 5567 2 1 1 1 16 TYR . B . 16 TYR c 1 5567 2 1 1 1 17 GLY . B . 17 GLY d 1 5567 2 1 1 1 18 VAL . B . 18 VAL d 1 5567 2 1 1 1 19 PHE . B . 19 PHE d 1 5567 2 1 1 1 20 ALA . B . 20 ALA d 1 5567 2 1 1 1 21 ARG . B . 21 ARG d 1 5567 2 1 1 1 22 LYS . B . 22 LYS d 1 5567 2 1 1 1 23 SER . B . 23 SER d 1 5567 2 1 1 1 24 PHE . B . 24 PHE d 1 5567 2 1 1 1 25 GLU . B . 25 GLU e 1 5567 2 1 1 1 26 LYS . B . 26 LYS h 1 5567 2 1 1 1 27 GLY . B . 27 GLY i 1 5567 2 1 1 1 28 GLU . B . 28 GLU a 1 5567 2 1 1 1 29 LEU . B . 29 LEU c 1 5567 2 1 1 1 30 VAL . B . 30 VAL d 1 5567 2 1 1 1 31 GLU . B . 31 GLU d 1 5567 2 1 1 1 32 GLU . B . 32 GLU d 1 5567 2 1 1 1 33 CYS . B . 33 CYS d 1 5567 2 1 1 1 34 LEU . B . 34 LEU d 1 5567 2 1 1 1 35 CYS . B . 35 CYS c 1 5567 2 1 1 1 36 ILE . B . 36 ILE c 1 5567 2 1 1 1 37 VAL . B . 37 VAL d 1 5567 2 1 1 1 38 ARG . B . 38 ARG d 1 5567 2 1 1 1 39 HIS . B . 39 HIS d 1 5567 2 1 1 1 40 ASN . B . 40 ASN f 1 5567 2 1 1 1 41 ASP . B . 41 ASP k 1 5567 2 1 1 1 42 ASP . B . 42 ASP l 1 5567 2 1 1 1 43 TRP . B . 43 TRP m 1 5567 2 1 1 1 44 GLY . B . 44 GLY m 1 5567 2 1 1 1 45 THR . B . 45 THR m 1 5567 2 1 1 1 46 ALA . B . 46 ALA m 1 5567 2 1 1 1 47 LEU . B . 47 LEU o 1 5567 2 1 1 1 48 GLU . B . 48 GLU c 1 5567 2 1 1 1 49 ASP . B . 49 ASP c 1 5567 2 1 1 1 50 TYR . B . 50 TYR d 1 5567 2 1 1 1 51 LEU . B . 51 LEU c 1 5567 2 1 1 1 52 PHE . B . 52 PHE d 1 5567 2 1 1 1 53 SER . B . 53 SER e 1 5567 2 1 1 1 54 ARG . B . 54 ARG h 1 5567 2 1 1 1 55 LYS . B . 55 LYS j 1 5567 2 1 1 1 56 ASN . B . 56 ASN a 1 5567 2 1 1 1 57 MET . B . 57 MET c 1 5567 2 1 1 1 58 SER . B . 58 SER c 1 5567 2 1 1 1 59 ALA . B . 59 ALA d 1 5567 2 1 1 1 60 MET . B . 60 MET d 1 5567 2 1 1 1 61 ALA . B . 61 ALA e 1 5567 2 1 1 1 62 LEU . B . 62 LEU h 1 5567 2 1 1 1 63 GLY . B . 63 GLY j 1 5567 2 1 1 1 64 PHE . B . 64 PHE l 1 5567 2 1 1 1 65 GLY . B . 65 GLY m 1 5567 2 1 1 1 66 ALA . B . 66 ALA m 1 5567 2 1 1 1 67 ILE . B . 67 ILE m 1 5567 2 1 1 1 68 PHE . B . 68 PHE m 1 5567 2 1 1 1 69 ASN . B . 69 ASN m 1 5567 2 1 1 1 70 HIS . B . 70 HIS p 1 5567 2 1 1 1 71 SER . B . 71 SER c 1 5567 2 1 1 1 72 LYS . B . 72 LYS b 1 5567 2 1 1 1 73 ASP . B . 73 ASP a 1 5567 2 1 1 1 74 PRO . B . 74 PRO f 1 5567 2 1 1 1 75 ASN . B . 75 ASN b 1 5567 2 1 1 1 76 ALA . B . 76 ALA a 1 5567 2 1 1 1 77 ARG . B . 77 ARG c 1 5567 2 1 1 1 78 HIS . B . 78 HIS d 1 5567 2 1 1 1 79 GLU . B . 79 GLU d 1 5567 2 1 1 1 80 LEU . B . 80 LEU d 1 5567 2 1 1 1 81 THR . B . 81 THR f 1 5567 2 1 1 1 82 ALA . B . 82 ALA k 1 5567 2 1 1 1 83 GLY . B . 83 GLY l 1 5567 2 1 1 1 84 LEU . B . 84 LEU m 1 5567 2 1 1 1 85 LYS . B . 85 LYS i 1 5567 2 1 1 1 86 ARG . B . 86 ARG d 1 5567 2 1 1 1 87 MET . B . 87 MET d 1 5567 2 1 1 1 88 ARG . B . 88 ARG d 1 5567 2 1 1 1 89 ILE . B . 89 ILE c 1 5567 2 1 1 1 90 PHE . B . 90 PHE d 1 5567 2 1 1 1 91 THR . B . 91 THR f 1 5567 2 1 1 1 92 ILE . B . 92 ILE b 1 5567 2 1 1 1 93 LYS . B . 93 LYS d 1 5567 2 1 1 1 94 PRO . B . 94 PRO c 1 5567 2 1 1 1 95 ILE . B . 95 ILE e 1 5567 2 1 1 1 96 ALA . B . 96 ALA h 1 5567 2 1 1 1 97 ILE . B . 97 ILE i 1 5567 2 1 1 1 98 GLY . B . 98 GLY a 1 5567 2 1 1 1 99 GLU . B . 99 GLU a 1 5567 2 1 1 1 100 GLU . B . 100 GLU c 1 5567 2 1 1 1 101 ILE . B . 101 ILE d 1 5567 2 1 1 1 102 THR . B . 102 THR e 1 5567 2 1 1 1 103 ILE . B . 103 ILE h 1 5567 2 1 1 1 104 SER . B . 104 SER e 1 5567 2 1 1 1 105 TYR . B . 105 TYR h 1 5567 2 1 1 1 106 GLY . B . 106 GLY j 1 5567 2 1 1 1 107 ASP . B . 107 ASP o 1 5567 2 1 1 1 108 ASP . B . 108 ASP p 1 5567 2 1 1 1 109 TYR . B . 109 TYR a 1 5567 2 1 1 1 110 TRP . B . 110 TRP d 1 5567 2 1 1 1 111 LEU . B . 111 LEU e 1 5567 2 1 1 1 112 SER . B . 112 SER h 1 5567 2 1 1 1 113 ARG . B . 113 ARG p 1 5567 2 1 1 1 114 PRO . B . 114 PRO a 1 5567 2 1 1 1 115 ARG . B . 115 ARG d 1 5567 2 1 1 1 116 LEU . B . 116 LEU e 1 5567 2 1 1 1 117 THR . B . 117 THR h 1 5567 2 1 1 1 118 GLN . B . 118 GLN . 1 5567 2 1 1 1 119 ASN . B . 119 ASN . 1 5567 2 stop_ save_