data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1jmc_1049#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1jmc.ent _PB_list.Output_file_name bmr5822_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5822_PB.str _PB_list.AA_seq_one_letter_code KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ _PB_list.PB_seq_code zzdfklgcfklmbdcdddddfbdcdddddddfhbacdddddddddfkbccddddehjlmmmmmmmccehiacddehiadddddfklpcbdcfbdcdddfklccdddddfkgccddddddddfklmmmpcehiacddddddfbacdddddddfknopacdddddddddfkopacddddehjlmmmpccehiiadddehiacdfehhiacdddfkbccdfbacbfklmmmmmmmmmmmzz _PB_list.PDB_ID 1JMC _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.33 _PB_list.PDBX_refine_ls_R_factor_R_work 0.1 _PB_list.PDBX_refine_ls_d_res_high 2.400 _PB_list.PDBX_refine_ls_d_res_low 6.000 _PB_list.Entry_ID 5822 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLN . A . 123 GLN d 1 5822 1 1 1 1 2 PHE . A . 124 PHE d 1 5822 1 1 1 1 3 ASP . A . 125 ASP d 1 5822 1 1 1 1 4 PHE . A . 126 PHE d 1 5822 1 1 1 1 5 THR . A . 127 THR d 1 5822 1 1 1 1 6 GLY . A . 128 GLY f 1 5822 1 1 1 1 7 ILE . A . 129 ILE k 1 5822 1 1 1 1 8 ASP . A . 130 ASP l 1 5822 1 1 1 1 9 ASP . A . 131 ASP m 1 5822 1 1 1 1 10 LEU . A . 132 LEU m 1 5822 1 1 1 1 11 GLU . A . 133 GLU m 1 5822 1 1 1 1 12 ASN . A . 134 ASN p 1 5822 1 1 1 1 13 LYS . A . 135 LYS c 1 5822 1 1 1 1 14 SER . A . 136 SER e 1 5822 1 1 1 1 15 LYS . A . 137 LYS h 1 5822 1 1 1 1 16 ASP . A . 138 ASP i 1 5822 1 1 1 1 17 SER . A . 139 SER a 1 5822 1 1 1 1 18 LEU . A . 140 LEU c 1 5822 1 1 1 1 19 VAL . A . 141 VAL d 1 5822 1 1 1 1 20 ASP . A . 142 ASP d 1 5822 1 1 1 1 21 ILE . A . 143 ILE d 1 5822 1 1 1 1 22 ILE . A . 144 ILE d 1 5822 1 1 1 1 23 GLY . A . 145 GLY d 1 5822 1 1 1 1 24 ILE . A . 146 ILE d 1 5822 1 1 1 1 25 CYS . A . 147 CYS f 1 5822 1 1 1 1 26 LYS . A . 148 LYS b 1 5822 1 1 1 1 27 SER . A . 149 SER a 1 5822 1 1 1 1 28 TYR . A . 150 TYR c 1 5822 1 1 1 1 29 GLU . A . 151 GLU d 1 5822 1 1 1 1 30 ASP . A . 152 ASP d 1 5822 1 1 1 1 31 ALA . A . 153 ALA d 1 5822 1 1 1 1 32 THR . A . 154 THR d 1 5822 1 1 1 1 33 LYS . A . 155 LYS d 1 5822 1 1 1 1 34 ILE . A . 156 ILE d 1 5822 1 1 1 1 35 THR . A . 157 THR d 1 5822 1 1 1 1 36 VAL . A . 158 VAL f 1 5822 1 1 1 1 37 ARG . A . 159 ARG k 1 5822 1 1 1 1 38 SER . A . 160 SER n 1 5822 1 1 1 1 39 ASN . A . 161 ASN o 1 5822 1 1 1 1 40 ASN . A . 162 ASN p 1 5822 1 1 1 1 41 ARG . A . 163 ARG a 1 5822 1 1 1 1 42 GLU . A . 164 GLU c 1 5822 1 1 1 1 43 VAL . A . 165 VAL d 1 5822 1 1 1 1 44 ALA . A . 166 ALA d 1 5822 1 1 1 1 45 LYS . A . 167 LYS d 1 5822 1 1 1 1 46 ARG . A . 168 ARG d 1 5822 1 1 1 1 47 ASN . A . 169 ASN d 1 5822 1 1 1 1 48 ILE . A . 170 ILE d 1 5822 1 1 1 1 49 TYR . A . 171 TYR d 1 5822 1 1 1 1 50 LEU . A . 172 LEU d 1 5822 1 1 1 1 51 MET . A . 173 MET d 1 5822 1 1 1 1 52 ASP . A . 174 ASP f 1 5822 1 1 1 1 53 THR . A . 175 THR k 1 5822 1 1 1 1 54 SER . A . 176 SER o 1 5822 1 1 1 1 55 GLY . A . 177 GLY p 1 5822 1 1 1 1 56 LYS . A . 178 LYS a 1 5822 1 1 1 1 57 VAL . A . 179 VAL c 1 5822 1 1 1 1 58 VAL . A . 180 VAL d 1 5822 1 1 1 1 59 THR . A . 181 THR d 1 5822 1 1 1 1 60 ALA . A . 182 ALA d 1 5822 1 1 1 1 61 THR . A . 183 THR d 1 5822 1 1 1 1 62 LEU . A . 184 LEU e 1 5822 1 1 1 1 63 TRP . A . 185 TRP h 1 5822 1 1 1 1 64 GLY . A . 186 GLY j 1 5822 1 1 1 1 65 GLU . A . 187 GLU l 1 5822 1 1 1 1 66 ASP . A . 188 ASP m 1 5822 1 1 1 1 67 ALA . A . 189 ALA m 1 5822 1 1 1 1 68 ASP . A . 190 ASP m 1 5822 1 1 1 1 69 LYS . A . 191 LYS p 1 5822 1 1 1 1 70 PHE . A . 192 PHE c 1 5822 1 1 1 1 71 ASP . A . 193 ASP c 1 5822 1 1 1 1 72 GLY . A . 194 GLY e 1 5822 1 1 1 1 73 SER . A . 195 SER h 1 5822 1 1 1 1 74 ARG . A . 196 ARG i 1 5822 1 1 1 1 75 GLN . A . 197 GLN i 1 5822 1 1 1 1 76 PRO . A . 198 PRO a 1 5822 1 1 1 1 77 VAL . A . 199 VAL d 1 5822 1 1 1 1 78 LEU . A . 200 LEU d 1 5822 1 1 1 1 79 ALA . A . 201 ALA d 1 5822 1 1 1 1 80 ILE . A . 202 ILE e 1 5822 1 1 1 1 81 LYS . A . 203 LYS h 1 5822 1 1 1 1 82 GLY . A . 204 GLY i 1 5822 1 1 1 1 83 ALA . A . 205 ALA a 1 5822 1 1 1 1 84 ARG . A . 206 ARG c 1 5822 1 1 1 1 85 VAL . A . 207 VAL d 1 5822 1 1 1 1 86 SER . A . 208 SER f 1 5822 1 1 1 1 87 ASP . A . 209 ASP e 1 5822 1 1 1 1 88 PHE . A . 210 PHE h 1 5822 1 1 1 1 89 GLY . A . 211 GLY h 1 5822 1 1 1 1 90 GLY . A . 212 GLY i 1 5822 1 1 1 1 91 ARG . A . 213 ARG a 1 5822 1 1 1 1 92 SER . A . 214 SER c 1 5822 1 1 1 1 93 LEU . A . 215 LEU d 1 5822 1 1 1 1 94 SER . A . 216 SER d 1 5822 1 1 1 1 95 VAL . A . 217 VAL d 1 5822 1 1 1 1 96 LEU . A . 218 LEU f 1 5822 1 1 1 1 97 SER . A . 219 SER k 1 5822 1 1 1 1 98 SER . A . 220 SER b 1 5822 1 1 1 1 99 SER . A . 221 SER c 1 5822 1 1 1 1 100 THR . A . 222 THR c 1 5822 1 1 1 1 101 ILE . A . 223 ILE d 1 5822 1 1 1 1 102 ILE . A . 224 ILE f 1 5822 1 1 1 1 103 ALA . A . 225 ALA b 1 5822 1 1 1 1 104 ASN . A . 226 ASN a 1 5822 1 1 1 1 105 PRO . A . 227 PRO c 1 5822 1 1 1 1 106 ASP . A . 228 ASP b 1 5822 1 1 1 1 107 ILE . A . 229 ILE f 1 5822 1 1 1 1 108 PRO . A . 230 PRO k 1 5822 1 1 1 1 109 GLU . A . 231 GLU l 1 5822 1 1 1 1 110 ALA . A . 232 ALA m 1 5822 1 1 1 1 111 TYR . A . 233 TYR m 1 5822 1 1 1 1 112 LYS . A . 234 LYS m 1 5822 1 1 1 1 113 LEU . A . 235 LEU m 1 5822 1 1 1 1 114 ARG . A . 236 ARG m 1 5822 1 1 1 1 115 GLY . A . 237 GLY m 1 5822 1 1 1 1 116 TRP . A . 238 TRP m 1 5822 1 1 1 1 117 PHE . A . 239 PHE m 1 5822 1 1 1 1 118 ASP . A . 240 ASP m 1 5822 1 1 1 1 119 ALA . A . 241 ALA m 1 5822 1 1 1 1 120 GLU . A . 242 GLU m 1 5822 1 1 1 1 121 GLY . A . 243 GLY . 1 5822 1 1 1 1 122 GLN . A . 244 GLN . 1 5822 1 1 1 1 123 ALA . A . 245 ALA . 1 5822 1 1 1 1 124 LEU . A . 246 LEU . 1 5822 1 stop_ save_