data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1xox_1374#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1xox.ent _PB_list.Output_file_name bmr6342_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr6342_PB.str _PB_list.AA_seq_one_letter_code MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKET _PB_list.PB_seq_code zzafbdfklmmlpmklmmmmpmnlmmlghiakbfklmmmnopacdddfklmmbccdehkopadehiachiafklmmmmmockblklmpccdfklmcfklmmmmmmmmmmmmmmmmzz _PB_list.PDB_ID 1XOX _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "Simulated annealing" _PB_list.Entry_ID 6342 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . A . 1 MET . 1 6342 1 1 1 1 2 GLY . A . 2 GLY . 1 6342 1 1 1 1 3 ALA . A . 3 ALA a 1 6342 1 1 1 1 4 PRO . A . 4 PRO f 1 6342 1 1 1 1 5 THR . A . 5 THR b 1 6342 1 1 1 1 6 LEU . A . 6 LEU d 1 6342 1 1 1 1 7 PRO . A . 7 PRO f 1 6342 1 1 1 1 8 PRO . A . 8 PRO k 1 6342 1 1 1 1 9 ALA . A . 9 ALA l 1 6342 1 1 1 1 10 TRP . A . 10 TRP m 1 6342 1 1 1 1 11 GLN . A . 11 GLN m 1 6342 1 1 1 1 12 PRO . A . 12 PRO l 1 6342 1 1 1 1 13 PHE . A . 13 PHE p 1 6342 1 1 1 1 14 LEU . A . 14 LEU m 1 6342 1 1 1 1 15 LYS . A . 15 LYS k 1 6342 1 1 1 1 16 ASP . A . 16 ASP l 1 6342 1 1 1 1 17 HIS . A . 17 HIS m 1 6342 1 1 1 1 18 ARG . A . 18 ARG m 1 6342 1 1 1 1 19 ILE . A . 19 ILE m 1 6342 1 1 1 1 20 SER . A . 20 SER m 1 6342 1 1 1 1 21 THR . A . 21 THR p 1 6342 1 1 1 1 22 PHE . A . 22 PHE m 1 6342 1 1 1 1 23 LYS . A . 23 LYS n 1 6342 1 1 1 1 24 ASN . A . 24 ASN l 1 6342 1 1 1 1 25 TRP . A . 25 TRP m 1 6342 1 1 1 1 26 PRO . A . 26 PRO m 1 6342 1 1 1 1 27 PHE . A . 27 PHE l 1 6342 1 1 1 1 28 LEU . A . 28 LEU g 1 6342 1 1 1 1 29 GLU . A . 29 GLU h 1 6342 1 1 1 1 30 GLY . A . 30 GLY i 1 6342 1 1 1 1 31 CYS . A . 31 CYS a 1 6342 1 1 1 1 32 ALA . A . 32 ALA k 1 6342 1 1 1 1 33 CYS . A . 33 CYS b 1 6342 1 1 1 1 34 THR . A . 34 THR f 1 6342 1 1 1 1 35 PRO . A . 35 PRO k 1 6342 1 1 1 1 36 GLU . A . 36 GLU l 1 6342 1 1 1 1 37 ARG . A . 37 ARG m 1 6342 1 1 1 1 38 MET . A . 38 MET m 1 6342 1 1 1 1 39 ALA . A . 39 ALA m 1 6342 1 1 1 1 40 GLU . A . 40 GLU n 1 6342 1 1 1 1 41 ALA . A . 41 ALA o 1 6342 1 1 1 1 42 GLY . A . 42 GLY p 1 6342 1 1 1 1 43 PHE . A . 43 PHE a 1 6342 1 1 1 1 44 ILE . A . 44 ILE c 1 6342 1 1 1 1 45 HIS . A . 45 HIS d 1 6342 1 1 1 1 46 CYS . A . 46 CYS d 1 6342 1 1 1 1 47 PRO . A . 47 PRO d 1 6342 1 1 1 1 48 THR . A . 48 THR f 1 6342 1 1 1 1 49 GLU . A . 49 GLU k 1 6342 1 1 1 1 50 ASN . A . 50 ASN l 1 6342 1 1 1 1 51 GLU . A . 51 GLU m 1 6342 1 1 1 1 52 PRO . A . 52 PRO m 1 6342 1 1 1 1 53 ASP . A . 53 ASP b 1 6342 1 1 1 1 54 LEU . A . 54 LEU c 1 6342 1 1 1 1 55 ALA . A . 55 ALA c 1 6342 1 1 1 1 56 GLN . A . 56 GLN d 1 6342 1 1 1 1 57 CYS . A . 57 CYS e 1 6342 1 1 1 1 58 PHE . A . 58 PHE h 1 6342 1 1 1 1 59 PHE . A . 59 PHE k 1 6342 1 1 1 1 60 CYS . A . 60 CYS o 1 6342 1 1 1 1 61 PHE . A . 61 PHE p 1 6342 1 1 1 1 62 LYS . A . 62 LYS a 1 6342 1 1 1 1 63 GLU . A . 63 GLU d 1 6342 1 1 1 1 64 LEU . A . 64 LEU e 1 6342 1 1 1 1 65 GLU . A . 65 GLU h 1 6342 1 1 1 1 66 GLY . A . 66 GLY i 1 6342 1 1 1 1 67 TRP . A . 67 TRP a 1 6342 1 1 1 1 68 GLU . A . 68 GLU c 1 6342 1 1 1 1 69 PRO . A . 69 PRO h 1 6342 1 1 1 1 70 ASP . A . 70 ASP i 1 6342 1 1 1 1 71 ASP . A . 71 ASP a 1 6342 1 1 1 1 72 ASP . A . 72 ASP f 1 6342 1 1 1 1 73 PRO . A . 73 PRO k 1 6342 1 1 1 1 74 ILE . A . 74 ILE l 1 6342 1 1 1 1 75 GLU . A . 75 GLU m 1 6342 1 1 1 1 76 GLU . A . 76 GLU m 1 6342 1 1 1 1 77 HIS . A . 77 HIS m 1 6342 1 1 1 1 78 LYS . A . 78 LYS m 1 6342 1 1 1 1 79 LYS . A . 79 LYS m 1 6342 1 1 1 1 80 HIS . A . 80 HIS o 1 6342 1 1 1 1 81 SER . A . 81 SER c 1 6342 1 1 1 1 82 SER . A . 82 SER k 1 6342 1 1 1 1 83 GLY . A . 83 GLY b 1 6342 1 1 1 1 84 CYS . A . 84 CYS l 1 6342 1 1 1 1 85 ALA . A . 85 ALA k 1 6342 1 1 1 1 86 PHE . A . 86 PHE l 1 6342 1 1 1 1 87 LEU . A . 87 LEU m 1 6342 1 1 1 1 88 SER . A . 88 SER p 1 6342 1 1 1 1 89 VAL . A . 89 VAL c 1 6342 1 1 1 1 90 LYS . A . 90 LYS c 1 6342 1 1 1 1 91 LYS . A . 91 LYS d 1 6342 1 1 1 1 92 GLN . A . 92 GLN f 1 6342 1 1 1 1 93 PHE . A . 93 PHE k 1 6342 1 1 1 1 94 GLU . A . 94 GLU l 1 6342 1 1 1 1 95 GLU . A . 95 GLU m 1 6342 1 1 1 1 96 LEU . A . 96 LEU c 1 6342 1 1 1 1 97 THR . A . 97 THR f 1 6342 1 1 1 1 98 LEU . A . 98 LEU k 1 6342 1 1 1 1 99 GLY . A . 99 GLY l 1 6342 1 1 1 1 100 GLU . A . 100 GLU m 1 6342 1 1 1 1 101 PHE . A . 101 PHE m 1 6342 1 1 1 1 102 LEU . A . 102 LEU m 1 6342 1 1 1 1 103 LYS . A . 103 LYS m 1 6342 1 1 1 1 104 LEU . A . 104 LEU m 1 6342 1 1 1 1 105 ASP . A . 105 ASP m 1 6342 1 1 1 1 106 ARG . A . 106 ARG m 1 6342 1 1 1 1 107 GLU . A . 107 GLU m 1 6342 1 1 1 1 108 ARG . A . 108 ARG m 1 6342 1 1 1 1 109 ALA . A . 109 ALA m 1 6342 1 1 1 1 110 LYS . A . 110 LYS m 1 6342 1 1 1 1 111 ASN . A . 111 ASN m 1 6342 1 1 1 1 112 LYS . A . 112 LYS m 1 6342 1 1 1 1 113 ILE . A . 113 ILE m 1 6342 1 1 1 1 114 ALA . A . 114 ALA m 1 6342 1 1 1 1 115 LYS . A . 115 LYS m 1 6342 1 1 1 1 116 GLU . A . 116 GLU . 1 6342 1 1 1 1 117 THR . A . 117 THR . 1 6342 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db1xox_1374#B _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1xox.ent _PB_list.Output_file_name bmr6342_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr6342_PB.str _PB_list.AA_seq_one_letter_code MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKET _PB_list.PB_seq_code zzafbdfklmmlpmklmmmmpmnlmmlghiakbfklmmmnopacdddfklmmbccdehkopadehiachiafklmmmmmockblklmpccdfklmcfklmmmmmmmmmmmmmmmmzz _PB_list.PDB_ID 1XOX _PB_list.PDBX_exptl_method "SOLUTION NMR" _PB_list.PDBX_NMR_refine_method "Simulated annealing" _PB_list.Entry_ID 6342 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . B . 1 MET . 1 6342 2 1 1 1 2 GLY . B . 2 GLY . 1 6342 2 1 1 1 3 ALA . B . 3 ALA a 1 6342 2 1 1 1 4 PRO . B . 4 PRO f 1 6342 2 1 1 1 5 THR . B . 5 THR b 1 6342 2 1 1 1 6 LEU . B . 6 LEU d 1 6342 2 1 1 1 7 PRO . B . 7 PRO f 1 6342 2 1 1 1 8 PRO . B . 8 PRO k 1 6342 2 1 1 1 9 ALA . B . 9 ALA l 1 6342 2 1 1 1 10 TRP . B . 10 TRP m 1 6342 2 1 1 1 11 GLN . B . 11 GLN m 1 6342 2 1 1 1 12 PRO . B . 12 PRO l 1 6342 2 1 1 1 13 PHE . B . 13 PHE p 1 6342 2 1 1 1 14 LEU . B . 14 LEU m 1 6342 2 1 1 1 15 LYS . B . 15 LYS k 1 6342 2 1 1 1 16 ASP . B . 16 ASP l 1 6342 2 1 1 1 17 HIS . B . 17 HIS m 1 6342 2 1 1 1 18 ARG . B . 18 ARG m 1 6342 2 1 1 1 19 ILE . B . 19 ILE m 1 6342 2 1 1 1 20 SER . B . 20 SER m 1 6342 2 1 1 1 21 THR . B . 21 THR p 1 6342 2 1 1 1 22 PHE . B . 22 PHE m 1 6342 2 1 1 1 23 LYS . B . 23 LYS n 1 6342 2 1 1 1 24 ASN . B . 24 ASN l 1 6342 2 1 1 1 25 TRP . B . 25 TRP m 1 6342 2 1 1 1 26 PRO . B . 26 PRO m 1 6342 2 1 1 1 27 PHE . B . 27 PHE l 1 6342 2 1 1 1 28 LEU . B . 28 LEU g 1 6342 2 1 1 1 29 GLU . B . 29 GLU h 1 6342 2 1 1 1 30 GLY . B . 30 GLY i 1 6342 2 1 1 1 31 CYS . B . 31 CYS a 1 6342 2 1 1 1 32 ALA . B . 32 ALA k 1 6342 2 1 1 1 33 CYS . B . 33 CYS b 1 6342 2 1 1 1 34 THR . B . 34 THR f 1 6342 2 1 1 1 35 PRO . B . 35 PRO k 1 6342 2 1 1 1 36 GLU . B . 36 GLU l 1 6342 2 1 1 1 37 ARG . B . 37 ARG m 1 6342 2 1 1 1 38 MET . B . 38 MET m 1 6342 2 1 1 1 39 ALA . B . 39 ALA m 1 6342 2 1 1 1 40 GLU . B . 40 GLU n 1 6342 2 1 1 1 41 ALA . B . 41 ALA o 1 6342 2 1 1 1 42 GLY . B . 42 GLY p 1 6342 2 1 1 1 43 PHE . B . 43 PHE a 1 6342 2 1 1 1 44 ILE . B . 44 ILE c 1 6342 2 1 1 1 45 HIS . B . 45 HIS d 1 6342 2 1 1 1 46 CYS . B . 46 CYS d 1 6342 2 1 1 1 47 PRO . B . 47 PRO d 1 6342 2 1 1 1 48 THR . B . 48 THR f 1 6342 2 1 1 1 49 GLU . B . 49 GLU k 1 6342 2 1 1 1 50 ASN . B . 50 ASN l 1 6342 2 1 1 1 51 GLU . B . 51 GLU m 1 6342 2 1 1 1 52 PRO . B . 52 PRO m 1 6342 2 1 1 1 53 ASP . B . 53 ASP b 1 6342 2 1 1 1 54 LEU . B . 54 LEU c 1 6342 2 1 1 1 55 ALA . B . 55 ALA c 1 6342 2 1 1 1 56 GLN . B . 56 GLN d 1 6342 2 1 1 1 57 CYS . B . 57 CYS e 1 6342 2 1 1 1 58 PHE . B . 58 PHE h 1 6342 2 1 1 1 59 PHE . B . 59 PHE k 1 6342 2 1 1 1 60 CYS . B . 60 CYS o 1 6342 2 1 1 1 61 PHE . B . 61 PHE p 1 6342 2 1 1 1 62 LYS . B . 62 LYS a 1 6342 2 1 1 1 63 GLU . B . 63 GLU d 1 6342 2 1 1 1 64 LEU . B . 64 LEU e 1 6342 2 1 1 1 65 GLU . B . 65 GLU h 1 6342 2 1 1 1 66 GLY . B . 66 GLY i 1 6342 2 1 1 1 67 TRP . B . 67 TRP a 1 6342 2 1 1 1 68 GLU . B . 68 GLU c 1 6342 2 1 1 1 69 PRO . B . 69 PRO h 1 6342 2 1 1 1 70 ASP . B . 70 ASP i 1 6342 2 1 1 1 71 ASP . B . 71 ASP a 1 6342 2 1 1 1 72 ASP . B . 72 ASP f 1 6342 2 1 1 1 73 PRO . B . 73 PRO k 1 6342 2 1 1 1 74 ILE . B . 74 ILE l 1 6342 2 1 1 1 75 GLU . B . 75 GLU m 1 6342 2 1 1 1 76 GLU . B . 76 GLU m 1 6342 2 1 1 1 77 HIS . B . 77 HIS m 1 6342 2 1 1 1 78 LYS . B . 78 LYS m 1 6342 2 1 1 1 79 LYS . B . 79 LYS m 1 6342 2 1 1 1 80 HIS . B . 80 HIS o 1 6342 2 1 1 1 81 SER . B . 81 SER c 1 6342 2 1 1 1 82 SER . B . 82 SER k 1 6342 2 1 1 1 83 GLY . B . 83 GLY b 1 6342 2 1 1 1 84 CYS . B . 84 CYS l 1 6342 2 1 1 1 85 ALA . B . 85 ALA k 1 6342 2 1 1 1 86 PHE . B . 86 PHE l 1 6342 2 1 1 1 87 LEU . B . 87 LEU m 1 6342 2 1 1 1 88 SER . B . 88 SER p 1 6342 2 1 1 1 89 VAL . B . 89 VAL c 1 6342 2 1 1 1 90 LYS . B . 90 LYS c 1 6342 2 1 1 1 91 LYS . B . 91 LYS d 1 6342 2 1 1 1 92 GLN . B . 92 GLN f 1 6342 2 1 1 1 93 PHE . B . 93 PHE k 1 6342 2 1 1 1 94 GLU . B . 94 GLU l 1 6342 2 1 1 1 95 GLU . B . 95 GLU m 1 6342 2 1 1 1 96 LEU . B . 96 LEU c 1 6342 2 1 1 1 97 THR . B . 97 THR f 1 6342 2 1 1 1 98 LEU . B . 98 LEU k 1 6342 2 1 1 1 99 GLY . B . 99 GLY l 1 6342 2 1 1 1 100 GLU . B . 100 GLU m 1 6342 2 1 1 1 101 PHE . B . 101 PHE m 1 6342 2 1 1 1 102 LEU . B . 102 LEU m 1 6342 2 1 1 1 103 LYS . B . 103 LYS m 1 6342 2 1 1 1 104 LEU . B . 104 LEU m 1 6342 2 1 1 1 105 ASP . B . 105 ASP m 1 6342 2 1 1 1 106 ARG . B . 106 ARG m 1 6342 2 1 1 1 107 GLU . B . 107 GLU m 1 6342 2 1 1 1 108 ARG . B . 108 ARG m 1 6342 2 1 1 1 109 ALA . B . 109 ALA m 1 6342 2 1 1 1 110 LYS . B . 110 LYS m 1 6342 2 1 1 1 111 ASN . B . 111 ASN m 1 6342 2 1 1 1 112 LYS . B . 112 LYS m 1 6342 2 1 1 1 113 ILE . B . 113 ILE m 1 6342 2 1 1 1 114 ALA . B . 114 ALA m 1 6342 2 1 1 1 115 LYS . B . 115 LYS m 1 6342 2 1 1 1 116 GLU . B . 116 GLU . 1 6342 2 1 1 1 117 THR . B . 117 THR . 1 6342 2 stop_ save_