data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1hh8_1411#A _PB_list.Queried_date 2014-12-15 _PB_list.Input_file_name pdb1hh8.ent _PB_list.Output_file_name bmr6399_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr6399_PB.str _PB_list.AA_seq_one_letter_code SLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGRLFRPNERQVAQL _PB_list.PB_seq_code zzlmmmmmmmmmmmmmnopaklmmmmmmmpghiafklmmmmmmmmmmnopaklmmmmmmmmmmmomklmklmmmmmmmmmmnopaklmmmmmmmmmmmnnopabdcfklnopacdddfklmmmmmmmmmmmnopaklmmmmmmmmmmmcfbfmlmmmmmmmmmmmnopacddddddehiacdddfklmmmzz _PB_list.PDB_ID 1HH8 _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.204 _PB_list.PDBX_refine_ls_R_factor_R_work 0.182 _PB_list.PDBX_refine_ls_d_res_high 1.8 _PB_list.PDBX_refine_ls_d_res_low 20.0 _PB_list.Entry_ID 6399 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLY . A . . . . 0 6399 1 1 1 1 2 ALA . A . . . . 0 6399 1 1 1 1 3 MET . A . . . . 0 6399 1 1 1 1 4 GLY . A . . . . 0 6399 1 1 1 1 5 SER . A . . . . 0 6399 1 1 1 1 6 MET . A . 1 MET . 0 6399 1 1 1 1 7 SER . A . 2 SER . 0 6399 1 1 1 1 8 LEU . A . 3 LEU . 1 6399 1 1 1 1 9 VAL . A . 4 VAL l 1 6399 1 1 1 1 10 GLU . A . 5 GLU m 1 6399 1 1 1 1 11 ALA . A . 6 ALA m 1 6399 1 1 1 1 12 ILE . A . 7 ILE m 1 6399 1 1 1 1 13 SER . A . 8 SER m 1 6399 1 1 1 1 14 LEU . A . 9 LEU m 1 6399 1 1 1 1 15 TRP . A . 10 TRP m 1 6399 1 1 1 1 16 ASN . A . 11 ASN m 1 6399 1 1 1 1 17 GLU . A . 12 GLU m 1 6399 1 1 1 1 18 GLY . A . 13 GLY m 1 6399 1 1 1 1 19 VAL . A . 14 VAL m 1 6399 1 1 1 1 20 LEU . A . 15 LEU m 1 6399 1 1 1 1 21 ALA . A . 16 ALA m 1 6399 1 1 1 1 22 ALA . A . 17 ALA m 1 6399 1 1 1 1 23 ASP . A . 18 ASP n 1 6399 1 1 1 1 24 LYS . A . 19 LYS o 1 6399 1 1 1 1 25 LYS . A . 20 LYS p 1 6399 1 1 1 1 26 ASP . A . 21 ASP a 1 6399 1 1 1 1 27 TRP . A . 22 TRP k 1 6399 1 1 1 1 28 LYS . A . 23 LYS l 1 6399 1 1 1 1 29 GLY . A . 24 GLY m 1 6399 1 1 1 1 30 ALA . A . 25 ALA m 1 6399 1 1 1 1 31 LEU . A . 26 LEU m 1 6399 1 1 1 1 32 ASP . A . 27 ASP m 1 6399 1 1 1 1 33 ALA . A . 28 ALA m 1 6399 1 1 1 1 34 PHE . A . 29 PHE m 1 6399 1 1 1 1 35 SER . A . 30 SER m 1 6399 1 1 1 1 36 ALA . A . 31 ALA p 1 6399 1 1 1 1 37 VAL . A . 32 VAL g 1 6399 1 1 1 1 38 GLN . A . 33 GLN h 1 6399 1 1 1 1 39 ASP . A . 34 ASP i 1 6399 1 1 1 1 40 PRO . A . 35 PRO a 1 6399 1 1 1 1 41 HIS . A . 36 HIS f 1 6399 1 1 1 1 42 SER . A . 37 SER k 1 6399 1 1 1 1 43 ARG . A . 38 ARG l 1 6399 1 1 1 1 44 ILE . A . 39 ILE m 1 6399 1 1 1 1 45 CYS . A . 40 CYS m 1 6399 1 1 1 1 46 PHE . A . 41 PHE m 1 6399 1 1 1 1 47 ASN . A . 42 ASN m 1 6399 1 1 1 1 48 ILE . A . 43 ILE m 1 6399 1 1 1 1 49 GLY . A . 44 GLY m 1 6399 1 1 1 1 50 CYS . A . 45 CYS m 1 6399 1 1 1 1 51 MET . A . 46 MET m 1 6399 1 1 1 1 52 TYR . A . 47 TYR m 1 6399 1 1 1 1 53 THR . A . 48 THR m 1 6399 1 1 1 1 54 ILE . A . 49 ILE n 1 6399 1 1 1 1 55 LEU . A . 50 LEU o 1 6399 1 1 1 1 56 LYS . A . 51 LYS p 1 6399 1 1 1 1 57 ASN . A . 52 ASN a 1 6399 1 1 1 1 58 MET . A . 53 MET k 1 6399 1 1 1 1 59 THR . A . 54 THR l 1 6399 1 1 1 1 60 GLU . A . 55 GLU m 1 6399 1 1 1 1 61 ALA . A . 56 ALA m 1 6399 1 1 1 1 62 GLU . A . 57 GLU m 1 6399 1 1 1 1 63 LYS . A . 58 LYS m 1 6399 1 1 1 1 64 ALA . A . 59 ALA m 1 6399 1 1 1 1 65 PHE . A . 60 PHE m 1 6399 1 1 1 1 66 THR . A . 61 THR m 1 6399 1 1 1 1 67 ARG . A . 62 ARG m 1 6399 1 1 1 1 68 SER . A . 63 SER m 1 6399 1 1 1 1 69 ILE . A . 64 ILE m 1 6399 1 1 1 1 70 ASN . A . 65 ASN m 1 6399 1 1 1 1 71 ARG . A . 66 ARG o 1 6399 1 1 1 1 72 ASP . A . 67 ASP m 1 6399 1 1 1 1 73 LYS . A . 68 LYS k 1 6399 1 1 1 1 74 HIS . A . 69 HIS l 1 6399 1 1 1 1 75 LEU . A . 70 LEU m 1 6399 1 1 1 1 76 ALA . A . 71 ALA k 1 6399 1 1 1 1 77 VAL . A . 72 VAL l 1 6399 1 1 1 1 78 ALA . A . 73 ALA m 1 6399 1 1 1 1 79 TYR . A . 74 TYR m 1 6399 1 1 1 1 80 PHE . A . 75 PHE m 1 6399 1 1 1 1 81 GLN . A . 76 GLN m 1 6399 1 1 1 1 82 ARG . A . 77 ARG m 1 6399 1 1 1 1 83 GLY . A . 78 GLY m 1 6399 1 1 1 1 84 MET . A . 79 MET m 1 6399 1 1 1 1 85 LEU . A . 80 LEU m 1 6399 1 1 1 1 86 TYR . A . 81 TYR m 1 6399 1 1 1 1 87 TYR . A . 82 TYR m 1 6399 1 1 1 1 88 GLN . A . 83 GLN n 1 6399 1 1 1 1 89 THR . A . 84 THR o 1 6399 1 1 1 1 90 GLU . A . 85 GLU p 1 6399 1 1 1 1 91 LYS . A . 86 LYS a 1 6399 1 1 1 1 92 TYR . A . 87 TYR k 1 6399 1 1 1 1 93 ASP . A . 88 ASP l 1 6399 1 1 1 1 94 LEU . A . 89 LEU m 1 6399 1 1 1 1 95 ALA . A . 90 ALA m 1 6399 1 1 1 1 96 ILE . A . 91 ILE m 1 6399 1 1 1 1 97 LYS . A . 92 LYS m 1 6399 1 1 1 1 98 ASP . A . 93 ASP m 1 6399 1 1 1 1 99 LEU . A . 94 LEU m 1 6399 1 1 1 1 100 LYS . A . 95 LYS m 1 6399 1 1 1 1 101 GLU . A . 96 GLU m 1 6399 1 1 1 1 102 ALA . A . 97 ALA m 1 6399 1 1 1 1 103 LEU . A . 98 LEU m 1 6399 1 1 1 1 104 ILE . A . 99 ILE m 1 6399 1 1 1 1 105 GLN . A . 100 GLN n 1 6399 1 1 1 1 106 LEU . A . 101 LEU n 1 6399 1 1 1 1 107 ARG . A . 102 ARG o 1 6399 1 1 1 1 108 GLY . A . 103 GLY p 1 6399 1 1 1 1 109 ASN . A . 104 ASN a 1 6399 1 1 1 1 110 GLN . A . 105 GLN b 1 6399 1 1 1 1 111 LEU . A . 106 LEU d 1 6399 1 1 1 1 112 ILE . A . 107 ILE c 1 6399 1 1 1 1 113 ASP . A . 108 ASP f 1 6399 1 1 1 1 114 TYR . A . 109 TYR k 1 6399 1 1 1 1 115 LYS . A . 110 LYS l 1 6399 1 1 1 1 116 ILE . A . 111 ILE n 1 6399 1 1 1 1 117 LEU . A . 112 LEU o 1 6399 1 1 1 1 118 GLY . A . 113 GLY p 1 6399 1 1 1 1 119 LEU . A . 114 LEU a 1 6399 1 1 1 1 120 GLN . A . 115 GLN c 1 6399 1 1 1 1 121 PHE . A . 116 PHE d 1 6399 1 1 1 1 122 LYS . A . 117 LYS d 1 6399 1 1 1 1 123 LEU . A . 118 LEU d 1 6399 1 1 1 1 124 PHE . A . 119 PHE f 1 6399 1 1 1 1 125 ALA . A . 120 ALA k 1 6399 1 1 1 1 126 CYS . A . 121 CYS l 1 6399 1 1 1 1 127 GLU . A . 122 GLU m 1 6399 1 1 1 1 128 VAL . A . 123 VAL m 1 6399 1 1 1 1 129 LEU . A . 124 LEU m 1 6399 1 1 1 1 130 TYR . A . 125 TYR m 1 6399 1 1 1 1 131 ASN . A . 126 ASN m 1 6399 1 1 1 1 132 ILE . A . 127 ILE m 1 6399 1 1 1 1 133 ALA . A . 128 ALA m 1 6399 1 1 1 1 134 PHE . A . 129 PHE m 1 6399 1 1 1 1 135 MET . A . 130 MET m 1 6399 1 1 1 1 136 TYR . A . 131 TYR m 1 6399 1 1 1 1 137 ALA . A . 132 ALA m 1 6399 1 1 1 1 138 LYS . A . 133 LYS n 1 6399 1 1 1 1 139 LYS . A . 134 LYS o 1 6399 1 1 1 1 140 GLU . A . 135 GLU p 1 6399 1 1 1 1 141 GLU . A . 136 GLU a 1 6399 1 1 1 1 142 TRP . A . 137 TRP k 1 6399 1 1 1 1 143 LYS . A . 138 LYS l 1 6399 1 1 1 1 144 LYS . A . 139 LYS m 1 6399 1 1 1 1 145 ALA . A . 140 ALA m 1 6399 1 1 1 1 146 GLU . A . 141 GLU m 1 6399 1 1 1 1 147 GLU . A . 142 GLU m 1 6399 1 1 1 1 148 GLN . A . 143 GLN m 1 6399 1 1 1 1 149 LEU . A . 144 LEU m 1 6399 1 1 1 1 150 ALA . A . 145 ALA m 1 6399 1 1 1 1 151 LEU . A . 146 LEU m 1 6399 1 1 1 1 152 ALA . A . 147 ALA m 1 6399 1 1 1 1 153 THR . A . 148 THR m 1 6399 1 1 1 1 154 SER . A . 149 SER m 1 6399 1 1 1 1 155 MET . A . 150 MET c 1 6399 1 1 1 1 156 LYS . A . 151 LYS f 1 6399 1 1 1 1 157 SER . A . 152 SER b 1 6399 1 1 1 1 158 GLU . A . 153 GLU f 1 6399 1 1 1 1 159 PRO . A . 154 PRO m 1 6399 1 1 1 1 160 ARG . A . 155 ARG l 1 6399 1 1 1 1 161 HIS . A . 156 HIS m 1 6399 1 1 1 1 162 SER . A . 157 SER m 1 6399 1 1 1 1 163 LYS . A . 158 LYS m 1 6399 1 1 1 1 164 ILE . A . 159 ILE m 1 6399 1 1 1 1 165 ASP . A . 160 ASP m 1 6399 1 1 1 1 166 LYS . A . 161 LYS m 1 6399 1 1 1 1 167 ALA . A . 162 ALA m 1 6399 1 1 1 1 168 MET . A . 163 MET m 1 6399 1 1 1 1 169 GLU . A . 164 GLU m 1 6399 1 1 1 1 170 CYS . A . 165 CYS m 1 6399 1 1 1 1 171 VAL . A . 166 VAL m 1 6399 1 1 1 1 172 TRP . A . 167 TRP n 1 6399 1 1 1 1 173 LYS . A . 168 LYS o 1 6399 1 1 1 1 174 GLN . A . 169 GLN p 1 6399 1 1 1 1 175 LYS . A . 170 LYS a 1 6399 1 1 1 1 176 LEU . A . 171 LEU c 1 6399 1 1 1 1 177 TYR . A . 172 TYR d 1 6399 1 1 1 1 178 GLU . A . 173 GLU d 1 6399 1 1 1 1 179 PRO . A . 174 PRO d 1 6399 1 1 1 1 180 VAL . A . 175 VAL d 1 6399 1 1 1 1 181 VAL . A . 176 VAL d 1 6399 1 1 1 1 182 ILE . A . 177 ILE d 1 6399 1 1 1 1 183 PRO . A . 178 PRO e 1 6399 1 1 1 1 184 VAL . A . 179 VAL h 0 6399 1 1 1 1 185 GLY . A . 180 GLY i 0 6399 1 1 1 1 186 LYS . A . 181 ARG a 0 6399 1 1 1 1 187 LEU . A . 182 LEU c 0 6399 1 1 1 1 188 PHE . A . 183 PHE d 0 6399 1 1 1 1 189 ARG . A . 184 ARG d 1 6399 1 1 1 1 190 PRO . A . 185 PRO d 1 6399 1 1 1 1 191 ASN . A . 186 ASN f 1 6399 1 1 1 1 192 GLU . A . 187 GLU k 1 6399 1 1 1 1 193 ARG . A . 188 ARG l 1 6399 1 1 1 1 194 GLN . A . 189 GLN m 1 6399 1 1 1 1 195 VAL . A . 190 VAL m 1 6399 1 1 1 1 196 ALA . A . 191 ALA m 1 6399 1 1 1 1 197 GLN . A . 192 GLN . 1 6399 1 1 1 1 198 LEU . A . 193 LEU . 1 6399 1 1 1 1 199 ALA . A . 194 ALA . 1 6399 1 1 1 1 200 LYS . A . 195 LYS . 1 6399 1 1 1 1 201 LYS . A . 196 LYS . 1 6399 1 1 1 1 202 ASP . A . 197 ASP . 1 6399 1 1 1 1 203 TYR . A . 198 TYR . 1 6399 1 1 1 1 204 LEU . A . 199 LEU . 1 6399 1 1 1 1 205 GLY . A . 200 GLY . 1 6399 1 1 1 1 206 LYS . A . 201 LYS . 1 6399 1 1 1 1 207 ALA . A . 202 ALA . 1 6399 1 1 1 1 208 THR . A . 203 THR . 1 6399 1 stop_ save_