data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db4nkq_10315#C _PB_list.Queried_date 2015-09-25 _PB_list.Input_file_name pdb4nkq.ent _PB_list.Output_file_name bmr15531_4nkq_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15531_4nkq_PB.str _PB_list.AA_seq_one_letter_code EHVNAIQEARRLLNLSRDTAAEMNETVEVISEMFDLQEPTCLQTRLELYKQGLRGSLTKLKGPLTMMASHYKQHCPPTPETSCATQIITFESFKENLKDFLLVIP _PB_list.PB_seq_code zzmmmmmmmmmmmmpccdfklmmpccdddfbacdfklccdfklmmmmmmgopgcjllmmmmmmmmmmmmmmmlacddfkkpacdddddfklmmmmmmmmmmmpzz _PB_list.PDB_ID 4NKQ _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.2729 _PB_list.PDBX_refine_ls_R_factor_R_work 0.2293 _PB_list.PDBX_refine_ls_d_res_high 3.301 _PB_list.PDBX_refine_ls_d_res_low 36.082 _PB_list.Entry_ID 15531 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 ALA . C . 1 ALA . 1 15531 1 1 1 1 2 PRO . C . 2 PRO . 1 15531 1 1 1 1 3 ALA . C . 3 ALA . 1 15531 1 1 1 1 4 ARG . C . 4 ARG . 1 15531 1 1 1 1 5 SER . C . 5 SER . 1 15531 1 1 1 1 6 PRO . C . 6 PRO . 1 15531 1 1 1 1 7 SER . C . 7 SER . 1 15531 1 1 1 1 8 PRO . C . 8 PRO . 1 15531 1 1 1 1 9 SER . C . 9 SER . 1 15531 1 1 1 1 10 THR . C . 10 THR . 1 15531 1 1 1 1 11 GLN . C . 11 GLN . 1 15531 1 1 1 1 12 PRO . C . 12 PRO . 1 15531 1 1 1 1 13 TRP . C . 13 TRP . 1 15531 1 1 1 1 14 GLU . C . 14 GLU . 1 15531 1 1 1 1 15 HIS . C . 15 HIS . 1 15531 1 1 1 1 16 VAL . C . 16 VAL m 1 15531 1 1 1 1 17 ASN . C . 17 ASN m 1 15531 1 1 1 1 18 ALA . C . 18 ALA m 1 15531 1 1 1 1 19 ILE . C . 19 ILE m 1 15531 1 1 1 1 20 GLN . C . 20 GLN m 1 15531 1 1 1 1 21 GLU . C . 21 GLU m 1 15531 1 1 1 1 22 ALA . C . 22 ALA m 1 15531 1 1 1 1 23 ARG . C . 23 ARG m 1 15531 1 1 1 1 24 ARG . C . 24 ARG m 1 15531 1 1 1 1 25 LEU . C . 25 LEU m 1 15531 1 1 1 1 26 LEU . C . 26 LEU m 1 15531 1 1 1 1 27 ASN . C . 27 ASN m 1 15531 1 1 1 1 28 LEU . C . 28 LEU p 1 15531 1 1 1 1 29 SER . C . 29 SER c 1 15531 1 1 1 1 30 ARG . C . 30 ARG c 1 15531 1 1 1 1 31 ASP . C . 31 ASP d 1 15531 1 1 1 1 32 THR . C . 32 THR f 1 15531 1 1 1 1 33 ALA . C . 33 ALA k 1 15531 1 1 1 1 34 ALA . C . 34 ALA l 1 15531 1 1 1 1 35 GLU . C . 35 GLU m 1 15531 1 1 1 1 36 MET . C . 36 MET m 1 15531 1 1 1 1 37 ASN . C . 37 ASN p 1 15531 1 1 1 1 38 GLU . C . 38 GLU c 1 15531 1 1 1 1 39 THR . C . 39 THR c 1 15531 1 1 1 1 40 VAL . C . 40 VAL d 1 15531 1 1 1 1 41 GLU . C . 41 GLU d 1 15531 1 1 1 1 42 VAL . C . 42 VAL d 1 15531 1 1 1 1 43 ILE . C . 43 ILE f 1 15531 1 1 1 1 44 SER . C . 44 SER b 1 15531 1 1 1 1 45 GLU . C . 45 GLU a 1 15531 1 1 1 1 46 MET . C . 46 MET c 1 15531 1 1 1 1 47 PHE . C . 47 PHE d 1 15531 1 1 1 1 48 ASP . C . 48 ASP f 1 15531 1 1 1 1 49 LEU . C . 49 LEU k 1 15531 1 1 1 1 50 GLN . C . 50 GLN l 1 15531 1 1 1 1 51 GLU . C . 51 GLU c 1 15531 1 1 1 1 52 PRO . C . 52 PRO c 1 15531 1 1 1 1 53 THR . C . 53 THR d 1 15531 1 1 1 1 54 CYS . C . 54 CYS f 1 15531 1 1 1 1 55 LEU . C . 55 LEU k 1 15531 1 1 1 1 56 GLN . C . 56 GLN l 1 15531 1 1 1 1 57 THR . C . 57 THR m 1 15531 1 1 1 1 58 ARG . C . 58 ARG m 1 15531 1 1 1 1 59 LEU . C . 59 LEU m 1 15531 1 1 1 1 60 GLU . C . 60 GLU m 1 15531 1 1 1 1 61 LEU . C . 61 LEU m 1 15531 1 1 1 1 62 TYR . C . 62 TYR m 1 15531 1 1 1 1 63 LYS . C . 63 LYS g 1 15531 1 1 1 1 64 GLN . C . 64 GLN o 1 15531 1 1 1 1 65 GLY . C . 65 GLY p 1 15531 1 1 1 1 66 LEU . C . 66 LEU g 1 15531 1 1 1 1 67 ARG . C . 67 ARG c 1 15531 1 1 1 1 68 GLY . C . 68 GLY j 1 15531 1 1 1 1 69 SER . C . 69 SER l 1 15531 1 1 1 1 70 LEU . C . 70 LEU l 1 15531 1 1 1 1 71 THR . C . 71 THR m 1 15531 1 1 1 1 72 LYS . C . 72 LYS m 1 15531 1 1 1 1 73 LEU . C . 73 LEU m 1 15531 1 1 1 1 74 LYS . C . 74 LYS m 1 15531 1 1 1 1 75 GLY . C . 75 GLY m 1 15531 1 1 1 1 76 PRO . C . 76 PRO m 1 15531 1 1 1 1 77 LEU . C . 77 LEU m 1 15531 1 1 1 1 78 THR . C . 78 THR m 1 15531 1 1 1 1 79 MET . C . 79 MET m 1 15531 1 1 1 1 80 MET . C . 80 MET m 1 15531 1 1 1 1 81 ALA . C . 81 ALA m 1 15531 1 1 1 1 82 SER . C . 82 SER m 1 15531 1 1 1 1 83 HIS . C . 83 HIS m 1 15531 1 1 1 1 84 TYR . C . 84 TYR m 1 15531 1 1 1 1 85 LYS . C . 85 LYS m 1 15531 1 1 1 1 86 GLN . C . 86 GLN l 1 15531 1 1 1 1 87 HIS . C . 87 HIS a 1 15531 1 1 1 1 88 CYS . C . 88 CYS c 1 15531 1 1 1 1 89 PRO . C . 89 PRO d 1 15531 1 1 1 1 90 PRO . C . 90 PRO d 1 15531 1 1 1 1 91 THR . C . 91 THR f 1 15531 1 1 1 1 92 PRO . C . 92 PRO k 1 15531 1 1 1 1 93 GLU . C . 93 GLU k 1 15531 1 1 1 1 94 THR . C . 94 THR p 1 15531 1 1 1 1 95 SER . C . 95 SER a 1 15531 1 1 1 1 96 CYS . C . 96 CYS c 1 15531 1 1 1 1 97 ALA . C . 97 ALA d 1 15531 1 1 1 1 98 THR . C . 98 THR d 1 15531 1 1 1 1 99 GLN . C . 99 GLN d 1 15531 1 1 1 1 100 ILE . C . 100 ILE d 1 15531 1 1 1 1 101 ILE . C . 101 ILE d 1 15531 1 1 1 1 102 THR . C . 102 THR f 1 15531 1 1 1 1 103 PHE . C . 103 PHE k 1 15531 1 1 1 1 104 GLU . C . 104 GLU l 1 15531 1 1 1 1 105 SER . C . 105 SER m 1 15531 1 1 1 1 106 PHE . C . 106 PHE m 1 15531 1 1 1 1 107 LYS . C . 107 LYS m 1 15531 1 1 1 1 108 GLU . C . 108 GLU m 1 15531 1 1 1 1 109 ASN . C . 109 ASN m 1 15531 1 1 1 1 110 LEU . C . 110 LEU m 1 15531 1 1 1 1 111 LYS . C . 111 LYS m 1 15531 1 1 1 1 112 ASP . C . 112 ASP m 1 15531 1 1 1 1 113 PHE . C . 113 PHE m 1 15531 1 1 1 1 114 LEU . C . 114 LEU m 1 15531 1 1 1 1 115 LEU . C . 115 LEU m 1 15531 1 1 1 1 116 VAL . C . 116 VAL p 1 15531 1 1 1 1 117 ILE . C . 117 ILE . 1 15531 1 1 1 1 118 PRO . C . 118 PRO . 1 15531 1 1 1 1 119 PHE . C . 119 PHE . 1 15531 1 1 1 1 120 ASP . C . 120 ASP . 1 15531 1 1 1 1 121 CYS . C . 121 CYS . 1 15531 1 1 1 1 122 TRP . C . 122 TRP . 1 15531 1 1 1 1 123 GLU . C . 123 GLU . 1 15531 1 1 1 1 124 PRO . C . 124 PRO . 1 15531 1 1 1 1 125 VAL . C . 125 VAL . 1 15531 1 1 1 1 126 GLN . C . 126 GLN . 1 15531 1 1 1 1 127 GLU . C . 127 GLU . 1 15531 1 stop_ save_