data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db3hup_8844#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3hup.ent _PB_list.Output_file_name bmr15703_3hup_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15703_3hup_PB.str _PB_list.AA_seq_one_letter_code DSHVSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK _PB_list.PB_seq_code zzdcdddehiaceehiacdddfbdcdfklmmmmmmmnopacdddfbfklmmmmmmmnmmadcdddddddehiacddfkopacehlaccehjdfbdcddfkbccdddfkbccddddddddzz _PB_list.PDB_ID 3HUP _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.1836 _PB_list.PDBX_refine_ls_R_factor_R_work 0.1331 _PB_list.PDBX_refine_ls_d_res_high 1.371 _PB_list.PDBX_refine_ls_d_res_low 28.172 _PB_list.Entry_ID 15703 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLY . A . 1 GLY . 1 15703 1 1 1 1 2 GLN . A . 2 GLN . 1 15703 1 1 1 1 3 TYR . A . 3 TYR . 1 15703 1 1 1 1 4 THR . A . 4 THR . 1 15703 1 1 1 1 5 PHE . A . 5 PHE . 1 15703 1 1 1 1 6 SER . A . 6 SER . 1 15703 1 1 1 1 7 MET . A . 7 MET . 1 15703 1 1 1 1 8 PRO . A . 8 PRO . 1 15703 1 1 1 1 9 SER . A . 9 SER . 1 15703 1 1 1 1 10 ASP . A . 10 ASP . 1 15703 1 1 1 1 11 SER . A . 11 SER . 1 15703 1 1 1 1 12 HIS . A . 12 HIS d 1 15703 1 1 1 1 13 VAL . A . 13 VAL c 1 15703 1 1 1 1 14 SER . A . 14 SER d 1 15703 1 1 1 1 15 SER . A . 15 SER d 1 15703 1 1 1 1 16 CYS . A . 16 CYS d 1 15703 1 1 1 1 17 SER . A . 17 SER e 1 15703 1 1 1 1 18 GLU . A . 18 GLU h 1 15703 1 1 1 1 19 ASP . A . 19 ASP i 1 15703 1 1 1 1 20 TRP . A . 20 TRP a 1 15703 1 1 1 1 21 VAL . A . 21 VAL c 1 15703 1 1 1 1 22 GLY . A . 22 GLY e 1 15703 1 1 1 1 23 TYR . A . 23 TYR e 1 15703 1 1 1 1 24 GLN . A . 24 GLN h 1 15703 1 1 1 1 25 ARG . A . 25 ARG i 1 15703 1 1 1 1 26 LYS . A . 26 LYS a 1 15703 1 1 1 1 27 CYS . A . 27 CYS c 1 15703 1 1 1 1 28 TYR . A . 28 TYR d 1 15703 1 1 1 1 29 PHE . A . 29 PHE d 1 15703 1 1 1 1 30 ILE . A . 30 ILE d 1 15703 1 1 1 1 31 SER . A . 31 SER f 1 15703 1 1 1 1 32 THR . A . 32 THR b 1 15703 1 1 1 1 33 VAL . A . 33 VAL d 1 15703 1 1 1 1 34 LYS . A . 34 LYS c 1 15703 1 1 1 1 35 ARG . A . 35 ARG d 1 15703 1 1 1 1 36 SER . A . 36 SER f 1 15703 1 1 1 1 37 TRP . A . 37 TRP k 1 15703 1 1 1 1 38 THR . A . 38 THR l 1 15703 1 1 1 1 39 SER . A . 39 SER m 1 15703 1 1 1 1 40 ALA . A . 40 ALA m 1 15703 1 1 1 1 41 GLN . A . 41 GLN m 1 15703 1 1 1 1 42 ASN . A . 42 ASN m 1 15703 1 1 1 1 43 ALA . A . 43 ALA m 1 15703 1 1 1 1 44 CYS . A . 44 CYS m 1 15703 1 1 1 1 45 SER . A . 45 SER m 1 15703 1 1 1 1 46 GLU . A . 46 GLU n 1 15703 1 1 1 1 47 HIS . A . 47 HIS o 1 15703 1 1 1 1 48 GLY . A . 48 GLY p 1 15703 1 1 1 1 49 ALA . A . 49 ALA a 1 15703 1 1 1 1 50 THR . A . 50 THR c 1 15703 1 1 1 1 51 LEU . A . 51 LEU d 1 15703 1 1 1 1 52 ALA . A . 52 ALA d 1 15703 1 1 1 1 53 VAL . A . 53 VAL d 1 15703 1 1 1 1 54 ILE . A . 54 ILE f 1 15703 1 1 1 1 55 ASP . A . 55 ASP b 1 15703 1 1 1 1 56 SER . A . 56 SER f 1 15703 1 1 1 1 57 GLU . A . 57 GLU k 1 15703 1 1 1 1 58 LYS . A . 58 LYS l 1 15703 1 1 1 1 59 ASP . A . 59 ASP m 1 15703 1 1 1 1 60 MET . A . 60 MET m 1 15703 1 1 1 1 61 ASN . A . 61 ASN m 1 15703 1 1 1 1 62 PHE . A . 62 PHE m 1 15703 1 1 1 1 63 LEU . A . 63 LEU m 1 15703 1 1 1 1 64 LYS . A . 64 LYS m 1 15703 1 1 1 1 65 ARG . A . 65 ARG m 1 15703 1 1 1 1 66 TYR . A . 66 TYR n 1 15703 1 1 1 1 67 ALA . A . 67 ALA m 1 15703 1 1 1 1 68 GLY . A . 68 GLY m 1 15703 1 1 1 1 69 ARG . A . 69 ARG a 1 15703 1 1 1 1 70 GLU . A . 70 GLU d 1 15703 1 1 1 1 71 GLU . A . 71 GLU c 1 15703 1 1 1 1 72 HIS . A . 72 HIS d 1 15703 1 1 1 1 73 TRP . A . 73 TRP d 1 15703 1 1 1 1 74 VAL . A . 74 VAL d 1 15703 1 1 1 1 75 GLY . A . 75 GLY d 1 15703 1 1 1 1 76 LEU . A . 76 LEU d 1 15703 1 1 1 1 77 LYS . A . 77 LYS d 1 15703 1 1 1 1 78 LYS . A . 78 LYS d 1 15703 1 1 1 1 79 GLU . A . 79 GLU e 1 15703 1 1 1 1 80 PRO . A . 80 PRO h 1 15703 1 1 1 1 81 GLY . A . 81 GLY i 1 15703 1 1 1 1 82 HIS . A . 82 HIS a 1 15703 1 1 1 1 83 PRO . A . 83 PRO c 1 15703 1 1 1 1 84 TRP . A . 84 TRP d 1 15703 1 1 1 1 85 LYS . A . 85 LYS d 1 15703 1 1 1 1 86 TRP . A . 86 TRP f 1 15703 1 1 1 1 87 SER . A . 87 SER k 1 15703 1 1 1 1 88 ASN . A . 88 ASN o 1 15703 1 1 1 1 89 GLY . A . 89 GLY p 1 15703 1 1 1 1 90 LYS . A . 90 LYS a 1 15703 1 1 1 1 91 GLU . A . 91 GLU c 1 15703 1 1 1 1 92 PHE . A . 92 PHE e 1 15703 1 1 1 1 93 ASN . A . 93 ASN h 1 15703 1 1 1 1 94 ASN . A . 94 ASN l 1 15703 1 1 1 1 95 TRP . A . 95 TRP a 1 15703 1 1 1 1 96 PHE . A . 96 PHE c 1 15703 1 1 1 1 97 ASN . A . 97 ASN c 1 15703 1 1 1 1 98 VAL . A . 98 VAL e 1 15703 1 1 1 1 99 THR . A . 99 THR h 1 15703 1 1 1 1 100 GLY . A . 100 GLY j 1 15703 1 1 1 1 101 SER . A . 101 SER d 1 15703 1 1 1 1 102 ASP . A . 102 ASP f 1 15703 1 1 1 1 103 LYS . A . 103 LYS b 1 15703 1 1 1 1 104 CYS . A . 104 CYS d 1 15703 1 1 1 1 105 VAL . A . 105 VAL c 1 15703 1 1 1 1 106 PHE . A . 106 PHE d 1 15703 1 1 1 1 107 LEU . A . 107 LEU d 1 15703 1 1 1 1 108 LYS . A . 108 LYS f 1 15703 1 1 1 1 109 ASN . A . 109 ASN k 1 15703 1 1 1 1 110 THR . A . 110 THR b 1 15703 1 1 1 1 111 GLU . A . 111 GLU c 1 15703 1 1 1 1 112 VAL . A . 112 VAL c 1 15703 1 1 1 1 113 SER . A . 113 SER d 1 15703 1 1 1 1 114 SER . A . 114 SER d 1 15703 1 1 1 1 115 MET . A . 115 MET d 1 15703 1 1 1 1 116 GLU . A . 116 GLU f 1 15703 1 1 1 1 117 CYS . A . 117 CYS k 1 15703 1 1 1 1 118 GLU . A . 118 GLU b 1 15703 1 1 1 1 119 LYS . A . 119 LYS c 1 15703 1 1 1 1 120 ASN . A . 120 ASN c 1 15703 1 1 1 1 121 LEU . A . 121 LEU d 1 15703 1 1 1 1 122 TYR . A . 122 TYR d 1 15703 1 1 1 1 123 TRP . A . 123 TRP d 1 15703 1 1 1 1 124 ILE . A . 124 ILE d 1 15703 1 1 1 1 125 CYS . A . 125 CYS d 1 15703 1 1 1 1 126 ASN . A . 126 ASN d 1 15703 1 1 1 1 127 LYS . A . 127 LYS d 1 15703 1 1 1 1 128 PRO . A . 128 PRO d 1 15703 1 1 1 1 129 TYR . A . 129 TYR . 1 15703 1 1 1 1 130 LYS . A . 130 LYS . 1 15703 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db3hup_8844#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3hup.ent _PB_list.Output_file_name bmr15703_3hup_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr15703_3hup_PB.str _PB_list.AA_seq_one_letter_code VSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK _PB_list.PB_seq_code zzbdfkbcceehiacdddfbdcdfklmmmmmmmnopacdddfbfklmmmmmmmnmmadcddfddcdehiacddfkopacehlaccehjbfbdcddfkbccdddfkbccddddddddzz _PB_list.PDB_ID 3HUP _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.1836 _PB_list.PDBX_refine_ls_R_factor_R_work 0.1331 _PB_list.PDBX_refine_ls_d_res_high 1.371 _PB_list.PDBX_refine_ls_d_res_low 28.172 _PB_list.Entry_ID 15703 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLY . B . 1 GLY . 1 15703 2 1 1 1 2 GLN . B . 2 GLN . 1 15703 2 1 1 1 3 TYR . B . 3 TYR . 1 15703 2 1 1 1 4 THR . B . 4 THR . 1 15703 2 1 1 1 5 PHE . B . 5 PHE . 1 15703 2 1 1 1 6 SER . B . 6 SER . 1 15703 2 1 1 1 7 MET . B . 7 MET . 1 15703 2 1 1 1 8 PRO . B . 8 PRO . 1 15703 2 1 1 1 9 SER . B . 9 SER . 1 15703 2 1 1 1 10 ASP . B . 10 ASP . 1 15703 2 1 1 1 11 SER . B . 11 SER . 1 15703 2 1 1 1 12 HIS . B . 12 HIS . 1 15703 2 1 1 1 13 VAL . B . 13 VAL . 1 15703 2 1 1 1 14 SER . B . 14 SER . 1 15703 2 1 1 1 15 SER . B . 15 SER b 1 15703 2 1 1 1 16 CYS . B . 16 CYS d 1 15703 2 1 1 1 17 SER . B . 17 SER f 1 15703 2 1 1 1 18 GLU . B . 18 GLU k 1 15703 2 1 1 1 19 ASP . B . 19 ASP b 1 15703 2 1 1 1 20 TRP . B . 20 TRP c 1 15703 2 1 1 1 21 VAL . B . 21 VAL c 1 15703 2 1 1 1 22 GLY . B . 22 GLY e 1 15703 2 1 1 1 23 TYR . B . 23 TYR e 1 15703 2 1 1 1 24 GLN . B . 24 GLN h 1 15703 2 1 1 1 25 ARG . B . 25 ARG i 1 15703 2 1 1 1 26 LYS . B . 26 LYS a 1 15703 2 1 1 1 27 CYS . B . 27 CYS c 1 15703 2 1 1 1 28 TYR . B . 28 TYR d 1 15703 2 1 1 1 29 PHE . B . 29 PHE d 1 15703 2 1 1 1 30 ILE . B . 30 ILE d 1 15703 2 1 1 1 31 SER . B . 31 SER f 1 15703 2 1 1 1 32 THR . B . 32 THR b 1 15703 2 1 1 1 33 VAL . B . 33 VAL d 1 15703 2 1 1 1 34 LYS . B . 34 LYS c 1 15703 2 1 1 1 35 ARG . B . 35 ARG d 1 15703 2 1 1 1 36 SER . B . 36 SER f 1 15703 2 1 1 1 37 TRP . B . 37 TRP k 1 15703 2 1 1 1 38 THR . B . 38 THR l 1 15703 2 1 1 1 39 SER . B . 39 SER m 1 15703 2 1 1 1 40 ALA . B . 40 ALA m 1 15703 2 1 1 1 41 GLN . B . 41 GLN m 1 15703 2 1 1 1 42 ASN . B . 42 ASN m 1 15703 2 1 1 1 43 ALA . B . 43 ALA m 1 15703 2 1 1 1 44 CYS . B . 44 CYS m 1 15703 2 1 1 1 45 SER . B . 45 SER m 1 15703 2 1 1 1 46 GLU . B . 46 GLU n 1 15703 2 1 1 1 47 HIS . B . 47 HIS o 1 15703 2 1 1 1 48 GLY . B . 48 GLY p 1 15703 2 1 1 1 49 ALA . B . 49 ALA a 1 15703 2 1 1 1 50 THR . B . 50 THR c 1 15703 2 1 1 1 51 LEU . B . 51 LEU d 1 15703 2 1 1 1 52 ALA . B . 52 ALA d 1 15703 2 1 1 1 53 VAL . B . 53 VAL d 1 15703 2 1 1 1 54 ILE . B . 54 ILE f 1 15703 2 1 1 1 55 ASP . B . 55 ASP b 1 15703 2 1 1 1 56 SER . B . 56 SER f 1 15703 2 1 1 1 57 GLU . B . 57 GLU k 1 15703 2 1 1 1 58 LYS . B . 58 LYS l 1 15703 2 1 1 1 59 ASP . B . 59 ASP m 1 15703 2 1 1 1 60 MET . B . 60 MET m 1 15703 2 1 1 1 61 ASN . B . 61 ASN m 1 15703 2 1 1 1 62 PHE . B . 62 PHE m 1 15703 2 1 1 1 63 LEU . B . 63 LEU m 1 15703 2 1 1 1 64 LYS . B . 64 LYS m 1 15703 2 1 1 1 65 ARG . B . 65 ARG m 1 15703 2 1 1 1 66 TYR . B . 66 TYR n 1 15703 2 1 1 1 67 ALA . B . 67 ALA m 1 15703 2 1 1 1 68 GLY . B . 68 GLY m 1 15703 2 1 1 1 69 ARG . B . 69 ARG a 1 15703 2 1 1 1 70 GLU . B . 70 GLU d 1 15703 2 1 1 1 71 GLU . B . 71 GLU c 1 15703 2 1 1 1 72 HIS . B . 72 HIS d 1 15703 2 1 1 1 73 TRP . B . 73 TRP d 1 15703 2 1 1 1 74 VAL . B . 74 VAL f 1 15703 2 1 1 1 75 GLY . B . 75 GLY d 1 15703 2 1 1 1 76 LEU . B . 76 LEU d 1 15703 2 1 1 1 77 LYS . B . 77 LYS c 1 15703 2 1 1 1 78 LYS . B . 78 LYS d 1 15703 2 1 1 1 79 GLU . B . 79 GLU e 1 15703 2 1 1 1 80 PRO . B . 80 PRO h 1 15703 2 1 1 1 81 GLY . B . 81 GLY i 1 15703 2 1 1 1 82 HIS . B . 82 HIS a 1 15703 2 1 1 1 83 PRO . B . 83 PRO c 1 15703 2 1 1 1 84 TRP . B . 84 TRP d 1 15703 2 1 1 1 85 LYS . B . 85 LYS d 1 15703 2 1 1 1 86 TRP . B . 86 TRP f 1 15703 2 1 1 1 87 SER . B . 87 SER k 1 15703 2 1 1 1 88 ASN . B . 88 ASN o 1 15703 2 1 1 1 89 GLY . B . 89 GLY p 1 15703 2 1 1 1 90 LYS . B . 90 LYS a 1 15703 2 1 1 1 91 GLU . B . 91 GLU c 1 15703 2 1 1 1 92 PHE . B . 92 PHE e 1 15703 2 1 1 1 93 ASN . B . 93 ASN h 1 15703 2 1 1 1 94 ASN . B . 94 ASN l 1 15703 2 1 1 1 95 TRP . B . 95 TRP a 1 15703 2 1 1 1 96 PHE . B . 96 PHE c 1 15703 2 1 1 1 97 ASN . B . 97 ASN c 1 15703 2 1 1 1 98 VAL . B . 98 VAL e 1 15703 2 1 1 1 99 THR . B . 99 THR h 1 15703 2 1 1 1 100 GLY . B . 100 GLY j 1 15703 2 1 1 1 101 SER . B . 101 SER b 1 15703 2 1 1 1 102 ASP . B . 102 ASP f 1 15703 2 1 1 1 103 LYS . B . 103 LYS b 1 15703 2 1 1 1 104 CYS . B . 104 CYS d 1 15703 2 1 1 1 105 VAL . B . 105 VAL c 1 15703 2 1 1 1 106 PHE . B . 106 PHE d 1 15703 2 1 1 1 107 LEU . B . 107 LEU d 1 15703 2 1 1 1 108 LYS . B . 108 LYS f 1 15703 2 1 1 1 109 ASN . B . 109 ASN k 1 15703 2 1 1 1 110 THR . B . 110 THR b 1 15703 2 1 1 1 111 GLU . B . 111 GLU c 1 15703 2 1 1 1 112 VAL . B . 112 VAL c 1 15703 2 1 1 1 113 SER . B . 113 SER d 1 15703 2 1 1 1 114 SER . B . 114 SER d 1 15703 2 1 1 1 115 MET . B . 115 MET d 1 15703 2 1 1 1 116 GLU . B . 116 GLU f 1 15703 2 1 1 1 117 CYS . B . 117 CYS k 1 15703 2 1 1 1 118 GLU . B . 118 GLU b 1 15703 2 1 1 1 119 LYS . B . 119 LYS c 1 15703 2 1 1 1 120 ASN . B . 120 ASN c 1 15703 2 1 1 1 121 LEU . B . 121 LEU d 1 15703 2 1 1 1 122 TYR . B . 122 TYR d 1 15703 2 1 1 1 123 TRP . B . 123 TRP d 1 15703 2 1 1 1 124 ILE . B . 124 ILE d 1 15703 2 1 1 1 125 CYS . B . 125 CYS d 1 15703 2 1 1 1 126 ASN . B . 126 ASN d 1 15703 2 1 1 1 127 LYS . B . 127 LYS d 1 15703 2 1 1 1 128 PRO . B . 128 PRO d 1 15703 2 1 1 1 129 TYR . B . 129 TYR . 1 15703 2 1 1 1 130 LYS . B . 130 LYS . 1 15703 2 stop_ save_