data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1hcv_6350#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1hcv.ent _PB_list.Output_file_name bmr4628_1hcv_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4628_1hcv_PB.str _PB_list.AA_seq_one_letter_code VQLQESGGGLVQAGGSLRLSCAASGRTGSTYDMGWFRQAPGKERESVAAINWDSARTYYASSVRGRFTISRDNAKKTVYLQMNSLKPEDTAVYTCGAGEGGTWDSWGQGTQVTVSS _PB_list.PB_seq_code zzdcehiacddehiacddddddeehiajkbccddddddehiacddfbdcdfklopacddfklgojaccdddfklopacdddehiafklgccddddddeehiafbdcebpaddddzz _PB_list.PDB_ID 1HCV _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.218 _PB_list.PDBX_refine_ls_R_factor_R_work 0.171 _PB_list.PDBX_refine_ls_d_res_high 1.85 _PB_list.PDBX_refine_ls_d_res_low 6.0 _PB_list.Entry_ID 4628 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 GLN . A . 1 ASP . 0 4628 1 1 1 1 2 VAL . A . 2 VAL . 0 4628 1 1 1 1 3 GLN . A . 3 GLN . 0 4628 1 1 1 1 4 LEU . A . 4 LEU d 1 4628 1 1 1 1 5 GLN . A . 5 GLN c 1 4628 1 1 1 1 6 GLU . A . 6 GLU e 1 4628 1 1 1 1 7 SER . A . 7 SER h 1 4628 1 1 1 1 8 GLY . A . 8 GLY i 1 4628 1 1 1 1 9 GLY . A . 9 GLY a 1 4628 1 1 1 1 10 GLY . A . 10 GLY c 1 4628 1 1 1 1 11 LEU . A . 11 LEU d 1 4628 1 1 1 1 12 VAL . A . 12 VAL d 1 4628 1 1 1 1 13 GLN . A . 13 GLN e 1 4628 1 1 1 1 14 ALA . A . 14 ALA h 1 4628 1 1 1 1 15 GLY . A . 15 GLY i 1 4628 1 1 1 1 16 GLY . A . 16 GLY a 1 4628 1 1 1 1 17 SER . A . 17 SER c 1 4628 1 1 1 1 18 LEU . A . 18 LEU d 1 4628 1 1 1 1 19 ARG . A . 19 ARG d 1 4628 1 1 1 1 20 LEU . A . 20 LEU d 1 4628 1 1 1 1 21 SER . A . 21 SER d 1 4628 1 1 1 1 22 CYS . A . 22 CYS d 1 4628 1 1 1 1 23 ALA . A . 23 ALA d 1 4628 1 1 1 1 24 ALA . A . 24 ALA e 1 4628 1 1 1 1 25 SER . A . 25 SER e 1 4628 1 1 1 1 26 GLY . A . 26 GLY h 1 4628 1 1 1 1 27 ARG . A . 27 ARG i 1 4628 1 1 1 1 28 THR . A . 28 THR a 1 4628 1 1 1 1 29 GLY . A . 29 GLY j 1 4628 1 1 1 1 30 SER . A . 30 SER k 1 4628 1 1 1 1 31 THR . A . 31 THR b 1 4628 1 1 1 1 32 TYR . A . 32 TYR c 1 4628 1 1 1 1 33 ASP . A . 33 ASP c 1 4628 1 1 1 1 34 MET . A . 34 MET d 1 4628 1 1 1 1 35 GLY . A . 35 GLY d 1 4628 1 1 1 1 36 TRP . A . 36 TRP d 1 4628 1 1 1 1 37 PHE . A . 37 PHE d 1 4628 1 1 1 1 38 ARG . A . 38 ARG d 1 4628 1 1 1 1 39 GLN . A . 39 GLN d 1 4628 1 1 1 1 40 ALA . A . 40 ALA e 1 4628 1 1 1 1 41 PRO . A . 41 PRO h 1 4628 1 1 1 1 42 GLY . A . 42 GLY i 1 4628 1 1 1 1 43 LYS . A . 43 LYS a 1 4628 1 1 1 1 44 GLU . A . 44 GLU c 1 4628 1 1 1 1 45 ARG . A . 45 ARG d 1 4628 1 1 1 1 46 GLU . A . 46 GLU d 1 4628 1 1 1 1 47 SER . A . 47 SER f 1 4628 1 1 1 1 48 VAL . A . 48 VAL b 1 4628 1 1 1 1 49 ALA . A . 49 ALA d 1 4628 1 1 1 1 50 ALA . A . 50 ALA c 1 4628 1 1 1 1 51 ILE . A . 51 ILE d 1 4628 1 1 1 1 52 ASN . A . 52 ASN f 1 4628 1 1 1 1 53 TRP . A A 53 TRP k 1 4628 1 1 1 1 54 ASP . A . 54 ASP l 1 4628 1 1 1 1 55 SER . A . 55 SER o 1 4628 1 1 1 1 56 ALA . A . 56 ALA p 1 4628 1 1 1 1 57 ARG . A . 57 ARG a 1 4628 1 1 1 1 58 THR . A . 58 THR c 1 4628 1 1 1 1 59 TYR . A . 59 TYR d 1 4628 1 1 1 1 60 TYR . A . 60 TYR d 1 4628 1 1 1 1 61 ALA . A . 61 ALA f 1 4628 1 1 1 1 62 SER . A . 62 SER k 1 4628 1 1 1 1 63 SER . A . 63 SER l 1 4628 1 1 1 1 64 VAL . A . 64 VAL g 1 4628 1 1 1 1 65 ARG . A . 65 ARG o 1 4628 1 1 1 1 66 GLY . A . 66 GLY j 1 4628 1 1 1 1 67 ARG . A . 67 ARG a 1 4628 1 1 1 1 68 PHE . A . 68 PHE c 1 4628 1 1 1 1 69 THR . A . 69 THR c 1 4628 1 1 1 1 70 ILE . A . 70 ILE d 1 4628 1 1 1 1 71 SER . A . 71 SER d 1 4628 1 1 1 1 72 ARG . A . 72 ARG d 1 4628 1 1 1 1 73 ASP . A . 73 ASP f 1 4628 1 1 1 1 74 ASN . A . 74 ASN k 1 4628 1 1 1 1 75 ALA . A . 75 ALA l 1 4628 1 1 1 1 76 LYS . A . 76 LYS o 1 4628 1 1 1 1 77 LYS . A . 77 LYS p 1 4628 1 1 1 1 78 THR . A . 78 THR a 1 4628 1 1 1 1 79 VAL . A . 79 VAL c 1 4628 1 1 1 1 80 TYR . A . 80 TYR d 1 4628 1 1 1 1 81 LEU . A . 81 LEU d 1 4628 1 1 1 1 82 GLN . A . 82 GLN d 1 4628 1 1 1 1 83 MET . A . 83 MET e 1 4628 1 1 1 1 84 ASN . A A 84 ASN h 1 4628 1 1 1 1 85 SER . A B 85 SER i 1 4628 1 1 1 1 86 LEU . A C 86 LEU a 1 4628 1 1 1 1 87 LYS . A . 87 LYS f 1 4628 1 1 1 1 88 PRO . A . 88 PRO k 1 4628 1 1 1 1 89 GLU . A . 89 GLU l 1 4628 1 1 1 1 90 ASP . A . 90 ASP g 1 4628 1 1 1 1 91 THR . A . 91 THR c 1 4628 1 1 1 1 92 ALA . A . 92 ALA c 1 4628 1 1 1 1 93 VAL . A . 93 VAL d 1 4628 1 1 1 1 94 TYR . A . 94 TYR d 1 4628 1 1 1 1 95 THR . A . 95 THR d 1 4628 1 1 1 1 96 CYS . A . 96 CYS d 1 4628 1 1 1 1 97 GLY . A . 97 GLY d 1 4628 1 1 1 1 98 ALA . A . 98 ALA d 1 4628 1 1 1 1 99 GLY . A . 99 GLY e 1 4628 1 1 1 1 100 GLU . A . 100 GLU e 1 4628 1 1 1 1 101 GLY . A . 101 GLY h 1 4628 1 1 1 1 102 GLY . A . 102 GLY i 1 4628 1 1 1 1 103 THR . A . 103 THR a 1 4628 1 1 1 1 104 TRP . A . 104 TRP f 1 4628 1 1 1 1 105 ASP . A . 105 ASP b 1 4628 1 1 1 1 106 SER . A . 106 SER d 1 4628 1 1 1 1 107 TRP . A . 107 TRP c 1 4628 1 1 1 1 108 GLY . A . 108 GLY e 1 4628 1 1 1 1 109 GLN . A . 109 GLN b 1 4628 1 1 1 1 110 GLY . A . 110 GLY p 1 4628 1 1 1 1 111 THR . A . 111 THR a 1 4628 1 1 1 1 112 GLN . A . 112 GLN d 1 4628 1 1 1 1 113 VAL . A . 113 VAL d 1 4628 1 1 1 1 114 THR . A . 114 THR d 1 4628 1 1 1 1 115 VAL . A . 115 VAL d 1 4628 1 1 1 1 116 SER . A . 116 SER . 1 4628 1 1 1 1 117 SER . A . 117 SER . 1 4628 1 stop_ save_