data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2fjy_7570#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2fjy.ent _PB_list.Output_file_name bmr4849_2fjy_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4849_2fjy_PB.str _PB_list.AA_seq_one_letter_code NLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV _PB_list.PB_seq_code zzbcfklmmmmmmmmnopafklmmmmmmmmpghiacfbfklmmmmmmmmmmmmlmmmnopacghiaklmmmmnopafklmmmmmmmmmmmmmmpccdfblmlmmmmmmmmmmmmmmmpmbacdfklmmmmmmmmzz _PB_list.PDB_ID 2FJY _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.27 _PB_list.PDBX_refine_ls_R_factor_R_work 0.22 _PB_list.PDBX_refine_ls_d_res_high 2.300 _PB_list.PDBX_refine_ls_d_res_low 43 _PB_list.Entry_ID 4849 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 SER . A . 1 SER . 1 4849 1 1 1 1 2 GLN . A . 2 GLN . 1 4849 1 1 1 1 3 GLU . A . 3 GLU . 1 4849 1 1 1 1 4 VAL . A . 4 VAL . 1 4849 1 1 1 1 5 MET . A . 5 MET . 1 4849 1 1 1 1 6 LYS . A . 6 LYS . 1 4849 1 1 1 1 7 ASN . A . 7 ASN . 1 4849 1 1 1 1 8 LEU . A . 8 LEU . 1 4849 1 1 1 1 9 SER . A . 9 SER b 1 4849 1 1 1 1 10 LEU . A . 10 LEU c 1 4849 1 1 1 1 11 ASN . A . 11 ASN f 1 4849 1 1 1 1 12 PHE . A . 12 PHE k 1 4849 1 1 1 1 13 GLY . A . 13 GLY l 1 4849 1 1 1 1 14 LYS . A . 14 LYS m 1 4849 1 1 1 1 15 ALA . A . 15 ALA m 1 4849 1 1 1 1 16 LEU . A . 16 LEU m 1 4849 1 1 1 1 17 ASP . A . 17 ASP m 1 4849 1 1 1 1 18 GLU . A . 18 GLU m 1 4849 1 1 1 1 19 CYS . A . 19 CYS m 1 4849 1 1 1 1 20 LYS . A . 20 LYS m 1 4849 1 1 1 1 21 LYS . A . 21 LYS m 1 4849 1 1 1 1 22 GLU . A . 22 GLU n 1 4849 1 1 1 1 23 MET . A . 23 MET o 1 4849 1 1 1 1 24 THR . A . 24 THR p 1 4849 1 1 1 1 25 LEU . A . 25 LEU a 1 4849 1 1 1 1 26 THR . A . 26 THR f 1 4849 1 1 1 1 27 ASP . A . 27 ASP k 1 4849 1 1 1 1 28 ALA . A . 28 ALA l 1 4849 1 1 1 1 29 ILE . A . 29 ILE m 1 4849 1 1 1 1 30 ASN . A . 30 ASN m 1 4849 1 1 1 1 31 GLU . A . 31 GLU m 1 4849 1 1 1 1 32 ASP . A . 32 ASP m 1 4849 1 1 1 1 33 PHE . A . 33 PHE m 1 4849 1 1 1 1 34 TYR . A . 34 TYR m 1 4849 1 1 1 1 35 ASN . A . 35 ASN m 1 4849 1 1 1 1 36 PHE . A . 36 PHE m 1 4849 1 1 1 1 37 TRP . A . 37 TRP p 1 4849 1 1 1 1 38 LYS . A . 38 LYS g 1 4849 1 1 1 1 39 GLU . A . 39 GLU h 1 4849 1 1 1 1 40 GLY . A . 40 GLY i 1 4849 1 1 1 1 41 TYR . A . 41 TYR a 1 4849 1 1 1 1 42 GLU . A . 42 GLU c 1 4849 1 1 1 1 43 ILE . A . 43 ILE f 1 4849 1 1 1 1 44 LYS . A . 44 LYS b 1 4849 1 1 1 1 45 ASN . A . 45 ASN f 1 4849 1 1 1 1 46 ARG . A . 46 ARG k 1 4849 1 1 1 1 47 GLU . A . 47 GLU l 1 4849 1 1 1 1 48 THR . A . 48 THR m 1 4849 1 1 1 1 49 GLY . A . 49 GLY m 1 4849 1 1 1 1 50 CYS . A . 50 CYS m 1 4849 1 1 1 1 51 ALA . A . 51 ALA m 1 4849 1 1 1 1 52 ILE . A . 52 ILE m 1 4849 1 1 1 1 53 MET . A . 53 MET m 1 4849 1 1 1 1 54 CYS . A . 54 CYS m 1 4849 1 1 1 1 55 LEU . A . 55 LEU m 1 4849 1 1 1 1 56 SER . A . 56 SER m 1 4849 1 1 1 1 57 THR . A . 57 THR m 1 4849 1 1 1 1 58 LYS . A . 58 LYS m 1 4849 1 1 1 1 59 LEU . A . 59 LEU m 1 4849 1 1 1 1 60 ASN . A . 60 ASN l 1 4849 1 1 1 1 61 MET . A . 61 MET m 1 4849 1 1 1 1 62 LEU . A . 62 LEU m 1 4849 1 1 1 1 63 ASP . A . 63 ASP m 1 4849 1 1 1 1 64 PRO . A . 64 PRO n 1 4849 1 1 1 1 65 GLU . A . 65 GLU o 1 4849 1 1 1 1 66 GLY . A . 66 GLY p 1 4849 1 1 1 1 67 ASN . A . 67 ASN a 1 4849 1 1 1 1 68 LEU . A . 68 LEU c 1 4849 1 1 1 1 69 HIS . A . 69 HIS g 1 4849 1 1 1 1 70 HIS . A . 70 HIS h 1 4849 1 1 1 1 71 GLY . A . 71 GLY i 1 4849 1 1 1 1 72 ASN . A . 72 ASN a 1 4849 1 1 1 1 73 ALA . A . 73 ALA k 1 4849 1 1 1 1 74 MET . A . 74 MET l 1 4849 1 1 1 1 75 GLU . A . 75 GLU m 1 4849 1 1 1 1 76 PHE . A . 76 PHE m 1 4849 1 1 1 1 77 ALA . A . 77 ALA m 1 4849 1 1 1 1 78 LYS . A . 78 LYS m 1 4849 1 1 1 1 79 LYS . A . 79 LYS n 1 4849 1 1 1 1 80 HIS . A . 80 HIS o 1 4849 1 1 1 1 81 GLY . A . 81 GLY p 1 4849 1 1 1 1 82 ALA . A . 82 ALA a 1 4849 1 1 1 1 83 ASP . A . 83 ASP f 1 4849 1 1 1 1 84 GLU . A . 84 GLU k 1 4849 1 1 1 1 85 THR . A . 85 THR l 1 4849 1 1 1 1 86 MET . A . 86 MET m 1 4849 1 1 1 1 87 ALA . A . 87 ALA m 1 4849 1 1 1 1 88 GLN . A . 88 GLN m 1 4849 1 1 1 1 89 GLN . A . 89 GLN m 1 4849 1 1 1 1 90 LEU . A . 90 LEU m 1 4849 1 1 1 1 91 ILE . A . 91 ILE m 1 4849 1 1 1 1 92 ASP . A . 92 ASP m 1 4849 1 1 1 1 93 ILE . A . 93 ILE m 1 4849 1 1 1 1 94 VAL . A . 94 VAL m 1 4849 1 1 1 1 95 HIS . A . 95 HIS m 1 4849 1 1 1 1 96 GLY . A . 96 GLY m 1 4849 1 1 1 1 97 CYS . A . 97 CYS m 1 4849 1 1 1 1 98 GLU . A . 98 GLU m 1 4849 1 1 1 1 99 LYS . A . 99 LYS m 1 4849 1 1 1 1 100 SER . A . 100 SER p 1 4849 1 1 1 1 101 THR . A . 101 THR c 1 4849 1 1 1 1 102 PRO . A . 102 PRO c 1 4849 1 1 1 1 103 ALA . A . 103 ALA d 1 4849 1 1 1 1 104 ASN . A . 104 ASN f 1 4849 1 1 1 1 105 ASP . A . 105 ASP b 1 4849 1 1 1 1 106 ASP . A . 106 ASP l 1 4849 1 1 1 1 107 LYS . A . 107 LYS m 1 4849 1 1 1 1 108 CYS . A . 108 CYS l 1 4849 1 1 1 1 109 ILE . A . 109 ILE m 1 4849 1 1 1 1 110 TRP . A . 110 TRP m 1 4849 1 1 1 1 111 THR . A . 111 THR m 1 4849 1 1 1 1 112 LEU . A . 112 LEU m 1 4849 1 1 1 1 113 GLY . A . 113 GLY m 1 4849 1 1 1 1 114 VAL . A . 114 VAL m 1 4849 1 1 1 1 115 ALA . A . 115 ALA m 1 4849 1 1 1 1 116 THR . A . 116 THR m 1 4849 1 1 1 1 117 CYS . A . 117 CYS m 1 4849 1 1 1 1 118 PHE . A . 118 PHE m 1 4849 1 1 1 1 119 LYS . A . 119 LYS m 1 4849 1 1 1 1 120 ALA . A . 120 ALA m 1 4849 1 1 1 1 121 GLU . A . 121 GLU m 1 4849 1 1 1 1 122 ILE . A . 122 ILE m 1 4849 1 1 1 1 123 HIS . A . 123 HIS m 1 4849 1 1 1 1 124 LYS . A . 124 LYS p 1 4849 1 1 1 1 125 LEU . A . 125 LEU m 1 4849 1 1 1 1 126 ASN . A . 126 ASN b 1 4849 1 1 1 1 127 TRP . A . 127 TRP a 1 4849 1 1 1 1 128 ALA . A . 128 ALA c 1 4849 1 1 1 1 129 PRO . A . 129 PRO d 1 4849 1 1 1 1 130 SER . A . 130 SER f 1 4849 1 1 1 1 131 MET . A . 131 MET k 1 4849 1 1 1 1 132 ASP . A . 132 ASP l 1 4849 1 1 1 1 133 VAL . A . 133 VAL m 1 4849 1 1 1 1 134 ALA . A . 134 ALA m 1 4849 1 1 1 1 135 VAL . A . 135 VAL m 1 4849 1 1 1 1 136 GLY . A . 136 GLY m 1 4849 1 1 1 1 137 GLU . A . 137 GLU m 1 4849 1 1 1 1 138 ILE . A . 138 ILE m 1 4849 1 1 1 1 139 LEU . A . 139 LEU m 1 4849 1 1 1 1 140 ALA . A . 140 ALA m 1 4849 1 1 1 1 141 GLU . A . 141 GLU . 1 4849 1 1 1 1 142 VAL . A . 142 VAL . 1 4849 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db2fjy_7570#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2fjy.ent _PB_list.Output_file_name bmr4849_2fjy_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr4849_2fjy_PB.str _PB_list.AA_seq_one_letter_code SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV _PB_list.PB_seq_code zzhxxxxxxxfklmmmmmmmmnopafklmmmmmmmmpghiacfbfklmmmmmmmmmmmmlmmmnopacghiaklmmmmnopafklmmmmmmmmmmmmmmpccdfblmlmmmmmmmmmmmmmmmpmbdcdfklmmmmmmmmzz _PB_list.PDB_ID 2FJY _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.27 _PB_list.PDBX_refine_ls_R_factor_R_work 0.22 _PB_list.PDBX_refine_ls_d_res_high 2.300 _PB_list.PDBX_refine_ls_d_res_low 43 _PB_list.Entry_ID 4849 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 SER . B . 1 SER . 1 4849 2 1 1 1 2 GLN . B . 2 GLN . 1 4849 2 1 1 1 3 GLU . B . 3 GLU h 1 4849 2 1 1 1 4 VAL . B . 4 VAL . 1 4849 2 1 1 1 5 MET . B . 5 MET . 1 4849 2 1 1 1 6 LYS . B . 6 LYS . 1 4849 2 1 1 1 7 ASN . B . 7 ASN . 1 4849 2 1 1 1 8 LEU . B . 8 LEU . 1 4849 2 1 1 1 9 SER . B . 9 SER . 1 4849 2 1 1 1 10 LEU . B . 10 LEU . 1 4849 2 1 1 1 11 ASN . B . 11 ASN f 1 4849 2 1 1 1 12 PHE . B . 12 PHE k 1 4849 2 1 1 1 13 GLY . B . 13 GLY l 1 4849 2 1 1 1 14 LYS . B . 14 LYS m 1 4849 2 1 1 1 15 ALA . B . 15 ALA m 1 4849 2 1 1 1 16 LEU . B . 16 LEU m 1 4849 2 1 1 1 17 ASP . B . 17 ASP m 1 4849 2 1 1 1 18 GLU . B . 18 GLU m 1 4849 2 1 1 1 19 CYS . B . 19 CYS m 1 4849 2 1 1 1 20 LYS . B . 20 LYS m 1 4849 2 1 1 1 21 LYS . B . 21 LYS m 1 4849 2 1 1 1 22 GLU . B . 22 GLU n 1 4849 2 1 1 1 23 MET . B . 23 MET o 1 4849 2 1 1 1 24 THR . B . 24 THR p 1 4849 2 1 1 1 25 LEU . B . 25 LEU a 1 4849 2 1 1 1 26 THR . B . 26 THR f 1 4849 2 1 1 1 27 ASP . B . 27 ASP k 1 4849 2 1 1 1 28 ALA . B . 28 ALA l 1 4849 2 1 1 1 29 ILE . B . 29 ILE m 1 4849 2 1 1 1 30 ASN . B . 30 ASN m 1 4849 2 1 1 1 31 GLU . B . 31 GLU m 1 4849 2 1 1 1 32 ASP . B . 32 ASP m 1 4849 2 1 1 1 33 PHE . B . 33 PHE m 1 4849 2 1 1 1 34 TYR . B . 34 TYR m 1 4849 2 1 1 1 35 ASN . B . 35 ASN m 1 4849 2 1 1 1 36 PHE . B . 36 PHE m 1 4849 2 1 1 1 37 TRP . B . 37 TRP p 1 4849 2 1 1 1 38 LYS . B . 38 LYS g 1 4849 2 1 1 1 39 GLU . B . 39 GLU h 1 4849 2 1 1 1 40 GLY . B . 40 GLY i 1 4849 2 1 1 1 41 TYR . B . 41 TYR a 1 4849 2 1 1 1 42 GLU . B . 42 GLU c 1 4849 2 1 1 1 43 ILE . B . 43 ILE f 1 4849 2 1 1 1 44 LYS . B . 44 LYS b 1 4849 2 1 1 1 45 ASN . B . 45 ASN f 1 4849 2 1 1 1 46 ARG . B . 46 ARG k 1 4849 2 1 1 1 47 GLU . B . 47 GLU l 1 4849 2 1 1 1 48 THR . B . 48 THR m 1 4849 2 1 1 1 49 GLY . B . 49 GLY m 1 4849 2 1 1 1 50 CYS . B . 50 CYS m 1 4849 2 1 1 1 51 ALA . B . 51 ALA m 1 4849 2 1 1 1 52 ILE . B . 52 ILE m 1 4849 2 1 1 1 53 MET . B . 53 MET m 1 4849 2 1 1 1 54 CYS . B . 54 CYS m 1 4849 2 1 1 1 55 LEU . B . 55 LEU m 1 4849 2 1 1 1 56 SER . B . 56 SER m 1 4849 2 1 1 1 57 THR . B . 57 THR m 1 4849 2 1 1 1 58 LYS . B . 58 LYS m 1 4849 2 1 1 1 59 LEU . B . 59 LEU m 1 4849 2 1 1 1 60 ASN . B . 60 ASN l 1 4849 2 1 1 1 61 MET . B . 61 MET m 1 4849 2 1 1 1 62 LEU . B . 62 LEU m 1 4849 2 1 1 1 63 ASP . B . 63 ASP m 1 4849 2 1 1 1 64 PRO . B . 64 PRO n 1 4849 2 1 1 1 65 GLU . B . 65 GLU o 1 4849 2 1 1 1 66 GLY . B . 66 GLY p 1 4849 2 1 1 1 67 ASN . B . 67 ASN a 1 4849 2 1 1 1 68 LEU . B . 68 LEU c 1 4849 2 1 1 1 69 HIS . B . 69 HIS g 1 4849 2 1 1 1 70 HIS . B . 70 HIS h 1 4849 2 1 1 1 71 GLY . B . 71 GLY i 1 4849 2 1 1 1 72 ASN . B . 72 ASN a 1 4849 2 1 1 1 73 ALA . B . 73 ALA k 1 4849 2 1 1 1 74 MET . B . 74 MET l 1 4849 2 1 1 1 75 GLU . B . 75 GLU m 1 4849 2 1 1 1 76 PHE . B . 76 PHE m 1 4849 2 1 1 1 77 ALA . B . 77 ALA m 1 4849 2 1 1 1 78 LYS . B . 78 LYS m 1 4849 2 1 1 1 79 LYS . B . 79 LYS n 1 4849 2 1 1 1 80 HIS . B . 80 HIS o 1 4849 2 1 1 1 81 GLY . B . 81 GLY p 1 4849 2 1 1 1 82 ALA . B . 82 ALA a 1 4849 2 1 1 1 83 ASP . B . 83 ASP f 1 4849 2 1 1 1 84 GLU . B . 84 GLU k 1 4849 2 1 1 1 85 THR . B . 85 THR l 1 4849 2 1 1 1 86 MET . B . 86 MET m 1 4849 2 1 1 1 87 ALA . B . 87 ALA m 1 4849 2 1 1 1 88 GLN . B . 88 GLN m 1 4849 2 1 1 1 89 GLN . B . 89 GLN m 1 4849 2 1 1 1 90 LEU . B . 90 LEU m 1 4849 2 1 1 1 91 ILE . B . 91 ILE m 1 4849 2 1 1 1 92 ASP . B . 92 ASP m 1 4849 2 1 1 1 93 ILE . B . 93 ILE m 1 4849 2 1 1 1 94 VAL . B . 94 VAL m 1 4849 2 1 1 1 95 HIS . B . 95 HIS m 1 4849 2 1 1 1 96 GLY . B . 96 GLY m 1 4849 2 1 1 1 97 CYS . B . 97 CYS m 1 4849 2 1 1 1 98 GLU . B . 98 GLU m 1 4849 2 1 1 1 99 LYS . B . 99 LYS m 1 4849 2 1 1 1 100 SER . B . 100 SER p 1 4849 2 1 1 1 101 THR . B . 101 THR c 1 4849 2 1 1 1 102 PRO . B . 102 PRO c 1 4849 2 1 1 1 103 ALA . B . 103 ALA d 1 4849 2 1 1 1 104 ASN . B . 104 ASN f 1 4849 2 1 1 1 105 ASP . B . 105 ASP b 1 4849 2 1 1 1 106 ASP . B . 106 ASP l 1 4849 2 1 1 1 107 LYS . B . 107 LYS m 1 4849 2 1 1 1 108 CYS . B . 108 CYS l 1 4849 2 1 1 1 109 ILE . B . 109 ILE m 1 4849 2 1 1 1 110 TRP . B . 110 TRP m 1 4849 2 1 1 1 111 THR . B . 111 THR m 1 4849 2 1 1 1 112 LEU . B . 112 LEU m 1 4849 2 1 1 1 113 GLY . B . 113 GLY m 1 4849 2 1 1 1 114 VAL . B . 114 VAL m 1 4849 2 1 1 1 115 ALA . B . 115 ALA m 1 4849 2 1 1 1 116 THR . B . 116 THR m 1 4849 2 1 1 1 117 CYS . B . 117 CYS m 1 4849 2 1 1 1 118 PHE . B . 118 PHE m 1 4849 2 1 1 1 119 LYS . B . 119 LYS m 1 4849 2 1 1 1 120 ALA . B . 120 ALA m 1 4849 2 1 1 1 121 GLU . B . 121 GLU m 1 4849 2 1 1 1 122 ILE . B . 122 ILE m 1 4849 2 1 1 1 123 HIS . B . 123 HIS m 1 4849 2 1 1 1 124 LYS . B . 124 LYS p 1 4849 2 1 1 1 125 LEU . B . 125 LEU m 1 4849 2 1 1 1 126 ASN . B . 126 ASN b 1 4849 2 1 1 1 127 TRP . B . 127 TRP d 1 4849 2 1 1 1 128 ALA . B . 128 ALA c 1 4849 2 1 1 1 129 PRO . B . 129 PRO d 1 4849 2 1 1 1 130 SER . B . 130 SER f 1 4849 2 1 1 1 131 MET . B . 131 MET k 1 4849 2 1 1 1 132 ASP . B . 132 ASP l 1 4849 2 1 1 1 133 VAL . B . 133 VAL m 1 4849 2 1 1 1 134 ALA . B . 134 ALA m 1 4849 2 1 1 1 135 VAL . B . 135 VAL m 1 4849 2 1 1 1 136 GLY . B . 136 GLY m 1 4849 2 1 1 1 137 GLU . B . 137 GLU m 1 4849 2 1 1 1 138 ILE . B . 138 ILE m 1 4849 2 1 1 1 139 LEU . B . 139 LEU m 1 4849 2 1 1 1 140 ALA . B . 140 ALA m 1 4849 2 1 1 1 141 GLU . B . 141 GLU . 1 4849 2 1 1 1 142 VAL . B . 142 VAL . 1 4849 2 stop_ save_