data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db1tmc_6713#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb1tmc.ent _PB_list.Output_file_name bmr5169_1tmc_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5169_1tmc_PB.str _PB_list.AA_seq_one_letter_code IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM _PB_list.PB_seq_code zzddddddddfbacdehiacddddddehiacfbdcddddeehiacfbacdddddddfkopacddddddddddfklccddddddfkbmbdcdddddfkzz _PB_list.PDB_ID 1TMC _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_work 0.207 _PB_list.PDBX_refine_ls_d_res_high 2.3 _PB_list.PDBX_refine_ls_d_res_low 6.0 _PB_list.Entry_ID 5169 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . B . 1 MET . 1 5169 1 1 1 1 2 ILE . B . 2 ILE . 1 5169 1 1 1 1 3 GLN . B . 3 GLN . 1 5169 1 1 1 1 4 ARG . B . 4 ARG d 1 5169 1 1 1 1 5 THR . B . 5 THR d 1 5169 1 1 1 1 6 PRO . B . 6 PRO d 1 5169 1 1 1 1 7 LYS . B . 7 LYS d 1 5169 1 1 1 1 8 ILE . B . 8 ILE d 1 5169 1 1 1 1 9 GLN . B . 9 GLN d 1 5169 1 1 1 1 10 VAL . B . 10 VAL d 1 5169 1 1 1 1 11 TYR . B . 11 TYR d 1 5169 1 1 1 1 12 SER . B . 12 SER f 1 5169 1 1 1 1 13 ARG . B . 13 ARG b 1 5169 1 1 1 1 14 HIS . B . 14 HIS a 1 5169 1 1 1 1 15 PRO . B . 15 PRO c 1 5169 1 1 1 1 16 ALA . B . 16 ALA d 1 5169 1 1 1 1 17 GLU . B . 17 GLU e 1 5169 1 1 1 1 18 ASN . B . 18 ASN h 1 5169 1 1 1 1 19 GLY . B . 19 GLY i 1 5169 1 1 1 1 20 LYS . B . 20 LYS a 1 5169 1 1 1 1 21 SER . B . 21 SER c 1 5169 1 1 1 1 22 ASN . B . 22 ASN d 1 5169 1 1 1 1 23 PHE . B . 23 PHE d 1 5169 1 1 1 1 24 LEU . B . 24 LEU d 1 5169 1 1 1 1 25 ASN . B . 25 ASN d 1 5169 1 1 1 1 26 CYS . B . 26 CYS d 1 5169 1 1 1 1 27 TYR . B . 27 TYR d 1 5169 1 1 1 1 28 VAL . B . 28 VAL e 1 5169 1 1 1 1 29 SER . B . 29 SER h 1 5169 1 1 1 1 30 GLY . B . 30 GLY i 1 5169 1 1 1 1 31 PHE . B . 31 PHE a 1 5169 1 1 1 1 32 HIS . B . 32 HIS c 1 5169 1 1 1 1 33 PRO . B . 33 PRO f 1 5169 1 1 1 1 34 SER . B . 34 SER b 1 5169 1 1 1 1 35 ASP . B . 35 ASP d 1 5169 1 1 1 1 36 ILE . B . 36 ILE c 1 5169 1 1 1 1 37 GLU . B . 37 GLU d 1 5169 1 1 1 1 38 VAL . B . 38 VAL d 1 5169 1 1 1 1 39 ASP . B . 39 ASP d 1 5169 1 1 1 1 40 LEU . B . 40 LEU d 1 5169 1 1 1 1 41 LEU . B . 41 LEU e 1 5169 1 1 1 1 42 LYS . B . 42 LYS e 1 5169 1 1 1 1 43 ASN . B . 43 ASN h 1 5169 1 1 1 1 44 GLY . B . 44 GLY i 1 5169 1 1 1 1 45 GLU . B . 45 GLU a 1 5169 1 1 1 1 46 ARG . B . 46 ARG c 1 5169 1 1 1 1 47 ILE . B . 47 ILE f 1 5169 1 1 1 1 48 GLU . B . 48 GLU b 1 5169 1 1 1 1 49 LYS . B . 49 LYS a 1 5169 1 1 1 1 50 VAL . B . 50 VAL c 1 5169 1 1 1 1 51 GLU . B . 51 GLU d 1 5169 1 1 1 1 52 HIS . B . 52 HIS d 1 5169 1 1 1 1 53 SER . B . 53 SER d 1 5169 1 1 1 1 54 ASP . B . 54 ASP d 1 5169 1 1 1 1 55 LEU . B . 55 LEU d 1 5169 1 1 1 1 56 SER . B . 56 SER d 1 5169 1 1 1 1 57 PHE . B . 57 PHE d 1 5169 1 1 1 1 58 SER . B . 58 SER f 1 5169 1 1 1 1 59 LYS . B . 59 LYS k 1 5169 1 1 1 1 60 ASP . B . 60 ASP o 1 5169 1 1 1 1 61 TRP . B . 61 TRP p 1 5169 1 1 1 1 62 SER . B . 62 SER a 1 5169 1 1 1 1 63 PHE . B . 63 PHE c 1 5169 1 1 1 1 64 TYR . B . 64 TYR d 1 5169 1 1 1 1 65 LEU . B . 65 LEU d 1 5169 1 1 1 1 66 LEU . B . 66 LEU d 1 5169 1 1 1 1 67 TYR . B . 67 TYR d 1 5169 1 1 1 1 68 TYR . B . 68 TYR d 1 5169 1 1 1 1 69 THR . B . 69 THR d 1 5169 1 1 1 1 70 GLU . B . 70 GLU d 1 5169 1 1 1 1 71 PHE . B . 71 PHE d 1 5169 1 1 1 1 72 THR . B . 72 THR d 1 5169 1 1 1 1 73 PRO . B . 73 PRO d 1 5169 1 1 1 1 74 THR . B . 74 THR f 1 5169 1 1 1 1 75 GLU . B . 75 GLU k 1 5169 1 1 1 1 76 LYS . B . 76 LYS l 1 5169 1 1 1 1 77 ASP . B . 77 ASP c 1 5169 1 1 1 1 78 GLU . B . 78 GLU c 1 5169 1 1 1 1 79 TYR . B . 79 TYR d 1 5169 1 1 1 1 80 ALA . B . 80 ALA d 1 5169 1 1 1 1 81 CYS . B . 81 CYS d 1 5169 1 1 1 1 82 ARG . B . 82 ARG d 1 5169 1 1 1 1 83 VAL . B . 83 VAL d 1 5169 1 1 1 1 84 ASN . B . 84 ASN d 1 5169 1 1 1 1 85 HIS . B . 85 HIS f 1 5169 1 1 1 1 86 VAL . B . 86 VAL k 1 5169 1 1 1 1 87 THR . B . 87 THR b 1 5169 1 1 1 1 88 LEU . B . 88 LEU m 1 5169 1 1 1 1 89 SER . B . 89 SER b 1 5169 1 1 1 1 90 GLN . B . 90 GLN d 1 5169 1 1 1 1 91 PRO . B . 91 PRO c 1 5169 1 1 1 1 92 LYS . B . 92 LYS d 1 5169 1 1 1 1 93 ILE . B . 93 ILE d 1 5169 1 1 1 1 94 VAL . B . 94 VAL d 1 5169 1 1 1 1 95 LYS . B . 95 LYS d 1 5169 1 1 1 1 96 TRP . B . 96 TRP d 1 5169 1 1 1 1 97 ASP . B . 97 ASP f 1 5169 1 1 1 1 98 ARG . B . 98 ARG k 1 5169 1 1 1 1 99 ASP . B . 99 ASP . 1 5169 1 1 1 1 100 MET . B . 100 MET . 1 5169 1 stop_ save_