data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db2d4f_7447#A _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb2d4f.ent _PB_list.Output_file_name bmr5169_2d4f_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5169_2d4f_PB.str _PB_list.AA_seq_one_letter_code MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDR _PB_list.PB_seq_code zzddddddddddddfklmmbccdddddehiacfbdcddddeehiacfbafbacdddfbfkbccddddddddddfkbccddddddfklmbacddddezz _PB_list.PDB_ID 2D4F _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.23339 _PB_list.PDBX_refine_ls_R_factor_R_work 0.20705 _PB_list.PDBX_refine_ls_d_res_high 1.70 _PB_list.PDBX_refine_ls_d_res_low 26.45 _PB_list.Entry_ID 5169 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . A . 1 MET . 1 5169 1 1 1 1 2 ILE . A . 2 ILE . 1 5169 1 1 1 1 3 GLN . A . 3 GLN d 1 5169 1 1 1 1 4 ARG . A . 4 ARG d 1 5169 1 1 1 1 5 THR . A . 5 THR d 1 5169 1 1 1 1 6 PRO . A . 6 PRO d 1 5169 1 1 1 1 7 LYS . A . 7 LYS d 1 5169 1 1 1 1 8 ILE . A . 8 ILE d 1 5169 1 1 1 1 9 GLN . A . 9 GLN d 1 5169 1 1 1 1 10 VAL . A . 10 VAL d 1 5169 1 1 1 1 11 TYR . A . 11 TYR d 1 5169 1 1 1 1 12 SER . A . 12 SER d 1 5169 1 1 1 1 13 ARG . A . 13 ARG d 1 5169 1 1 1 1 14 HIS . A . 14 HIS d 1 5169 1 1 1 1 15 PRO . A . 15 PRO f 1 5169 1 1 1 1 16 ALA . A . 16 ALA k 1 5169 1 1 1 1 17 GLU . A . 17 GLU l 1 5169 1 1 1 1 18 ASN . A . 18 ASN m 1 5169 1 1 1 1 19 GLY . A . 19 GLY m 1 5169 1 1 1 1 20 LYS . A . 20 LYS b 1 5169 1 1 1 1 21 SER . A . 21 SER c 1 5169 1 1 1 1 22 ASN . A . 22 ASN c 1 5169 1 1 1 1 23 PHE . A . 23 PHE d 1 5169 1 1 1 1 24 LEU . A . 24 LEU d 1 5169 1 1 1 1 25 ASN . A . 25 ASN d 1 5169 1 1 1 1 26 CYS . A . 26 CYS d 1 5169 1 1 1 1 27 TYR . A . 27 TYR d 1 5169 1 1 1 1 28 VAL . A . 28 VAL e 1 5169 1 1 1 1 29 SER . A . 29 SER h 1 5169 1 1 1 1 30 GLY . A . 30 GLY i 1 5169 1 1 1 1 31 PHE . A . 31 PHE a 1 5169 1 1 1 1 32 HIS . A . 32 HIS c 1 5169 1 1 1 1 33 PRO . A . 33 PRO f 1 5169 1 1 1 1 34 SER . A . 34 SER b 1 5169 1 1 1 1 35 ASP . A . 35 ASP d 1 5169 1 1 1 1 36 ILE . A . 36 ILE c 1 5169 1 1 1 1 37 GLU . A . 37 GLU d 1 5169 1 1 1 1 38 VAL . A . 38 VAL d 1 5169 1 1 1 1 39 ASP . A . 39 ASP d 1 5169 1 1 1 1 40 LEU . A . 40 LEU d 1 5169 1 1 1 1 41 LEU . A . 41 LEU e 1 5169 1 1 1 1 42 LYS . A . 42 LYS e 1 5169 1 1 1 1 43 ASN . A . 43 ASN h 1 5169 1 1 1 1 44 GLY . A . 44 GLY i 1 5169 1 1 1 1 45 GLU . A . 45 GLU a 1 5169 1 1 1 1 46 ARG . A . 46 ARG c 1 5169 1 1 1 1 47 ILE . A . 47 ILE f 1 5169 1 1 1 1 48 GLU . A . 48 GLU b 1 5169 1 1 1 1 49 LYS . A . 49 LYS a 1 5169 1 1 1 1 50 VAL . A . 50 VAL f 1 5169 1 1 1 1 51 GLU . A . 51 GLU b 1 5169 1 1 1 1 52 HIS . A . 52 HIS a 1 5169 1 1 1 1 53 SER . A . 53 SER c 1 5169 1 1 1 1 54 ASP . A . 54 ASP d 1 5169 1 1 1 1 55 LEU . A . 55 LEU d 1 5169 1 1 1 1 56 SER . A . 56 SER d 1 5169 1 1 1 1 57 PHE . A . 57 PHE f 1 5169 1 1 1 1 58 SER . A . 58 SER b 1 5169 1 1 1 1 59 LYS . A . 59 LYS f 1 5169 1 1 1 1 60 ASP . A . 60 ASP k 1 5169 1 1 1 1 61 TRP . A . 61 TRP b 1 5169 1 1 1 1 62 SER . A . 62 SER c 1 5169 1 1 1 1 63 PHE . A . 63 PHE c 1 5169 1 1 1 1 64 TYR . A . 64 TYR d 1 5169 1 1 1 1 65 LEU . A . 65 LEU d 1 5169 1 1 1 1 66 LEU . A . 66 LEU d 1 5169 1 1 1 1 67 TYR . A . 67 TYR d 1 5169 1 1 1 1 68 TYR . A . 68 TYR d 1 5169 1 1 1 1 69 THR . A . 69 THR d 1 5169 1 1 1 1 70 GLU . A . 70 GLU d 1 5169 1 1 1 1 71 PHE . A . 71 PHE d 1 5169 1 1 1 1 72 THR . A . 72 THR d 1 5169 1 1 1 1 73 PRO . A . 73 PRO d 1 5169 1 1 1 1 74 THR . A . 74 THR f 1 5169 1 1 1 1 75 GLU . A . 75 GLU k 1 5169 1 1 1 1 76 LYS . A . 76 LYS b 1 5169 1 1 1 1 77 ASP . A . 77 ASP c 1 5169 1 1 1 1 78 GLU . A . 78 GLU c 1 5169 1 1 1 1 79 TYR . A . 79 TYR d 1 5169 1 1 1 1 80 ALA . A . 80 ALA d 1 5169 1 1 1 1 81 CYS . A . 81 CYS d 1 5169 1 1 1 1 82 ARG . A . 82 ARG d 1 5169 1 1 1 1 83 VAL . A . 83 VAL d 1 5169 1 1 1 1 84 ASN . A . 84 ASN d 1 5169 1 1 1 1 85 HIS . A . 85 HIS f 1 5169 1 1 1 1 86 VAL . A . 86 VAL k 1 5169 1 1 1 1 87 THR . A . 87 THR l 1 5169 1 1 1 1 88 LEU . A . 88 LEU m 1 5169 1 1 1 1 89 SER . A . 89 SER b 1 5169 1 1 1 1 90 GLN . A . 90 GLN a 1 5169 1 1 1 1 91 PRO . A . 91 PRO c 1 5169 1 1 1 1 92 LYS . A . 92 LYS d 1 5169 1 1 1 1 93 ILE . A . 93 ILE d 1 5169 1 1 1 1 94 VAL . A . 94 VAL d 1 5169 1 1 1 1 95 LYS . A . 95 LYS d 1 5169 1 1 1 1 96 TRP . A . 96 TRP e 1 5169 1 1 1 1 97 ASP . A . 97 ASP . 1 5169 1 1 1 1 98 ARG . A . 98 ARG . 1 5169 1 1 1 1 99 ASP . A . 99 ASP . 1 5169 1 1 1 1 100 MET . A . 100 MET . 1 5169 1 stop_ save_