data_PB ############################# # Protein Blocks Annotation # ############################# ####################################################################################### # PB encoding by Protein Blocks Expert 2.0 server (http://www.bo-protscience.fr/pbe/) # # Reference: Biophys Rev. 2010 Aug;2(3):137-147. Epub 2010 Aug 5. # # : Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W119-23. # ####################################################################################### save_PB_annotation_1 _PB_list.Sf_category PB_list _PB_list.ID 1 _PB_list.Query_ID db3bzf_8933#B _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3bzf.ent _PB_list.Output_file_name bmr5782_3bzf_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5782_3bzf_PB.str _PB_list.AA_seq_one_letter_code RTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM _PB_list.PB_seq_code zzcdddddfbdcdehiacddddddehiacfbdcddddeehiacehiacddddddfkopacddddddddddfkbccddddddfklmbdcdddddfkzz _PB_list.PDB_ID 3BZF _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.26936 _PB_list.PDBX_refine_ls_R_factor_R_work 0.20018 _PB_list.PDBX_refine_ls_d_res_high 2.50 _PB_list.PDBX_refine_ls_d_res_low 29.60 _PB_list.Entry_ID 5782 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . B . 1 ARG . 0 5782 1 1 1 1 2 THR . B . 2 THR . 0 5782 1 1 1 1 3 PRO . B . 3 PRO c 0 5782 1 1 1 1 4 LYS . B . 4 LYS d 1 5782 1 1 1 1 5 ILE . B . 5 ILE d 1 5782 1 1 1 1 6 GLN . B . 6 GLN d 1 5782 1 1 1 1 7 VAL . B . 7 VAL d 1 5782 1 1 1 1 8 TYR . B . 8 TYR d 1 5782 1 1 1 1 9 SER . B . 9 SER f 1 5782 1 1 1 1 10 ARG . B . 10 ARG b 1 5782 1 1 1 1 11 HIS . B . 11 HIS d 1 5782 1 1 1 1 12 PRO . B . 12 PRO c 1 5782 1 1 1 1 13 ALA . B . 13 ALA d 1 5782 1 1 1 1 14 GLU . B . 14 GLU e 1 5782 1 1 1 1 15 ASN . B . 15 ASN h 1 5782 1 1 1 1 16 GLY . B . 16 GLY i 1 5782 1 1 1 1 17 LYS . B . 17 LYS a 1 5782 1 1 1 1 18 SER . B . 18 SER c 1 5782 1 1 1 1 19 ASN . B . 19 ASN d 1 5782 1 1 1 1 20 PHE . B . 20 PHE d 1 5782 1 1 1 1 21 LEU . B . 21 LEU d 1 5782 1 1 1 1 22 ASN . B . 22 ASN d 1 5782 1 1 1 1 23 CYS . B . 23 CYS d 1 5782 1 1 1 1 24 TYR . B . 24 TYR d 1 5782 1 1 1 1 25 VAL . B . 25 VAL e 1 5782 1 1 1 1 26 SER . B . 26 SER h 1 5782 1 1 1 1 27 GLY . B . 27 GLY i 1 5782 1 1 1 1 28 PHE . B . 28 PHE a 1 5782 1 1 1 1 29 HIS . B . 29 HIS c 1 5782 1 1 1 1 30 PRO . B . 30 PRO f 1 5782 1 1 1 1 31 SER . B . 31 SER b 1 5782 1 1 1 1 32 ASP . B . 32 ASP d 1 5782 1 1 1 1 33 ILE . B . 33 ILE c 1 5782 1 1 1 1 34 GLU . B . 34 GLU d 1 5782 1 1 1 1 35 VAL . B . 35 VAL d 1 5782 1 1 1 1 36 ASP . B . 36 ASP d 1 5782 1 1 1 1 37 LEU . B . 37 LEU d 1 5782 1 1 1 1 38 LEU . B . 38 LEU e 1 5782 1 1 1 1 39 LYS . B . 39 LYS e 1 5782 1 1 1 1 40 ASN . B . 40 ASN h 1 5782 1 1 1 1 41 GLY . B . 41 GLY i 1 5782 1 1 1 1 42 GLU . B . 42 GLU a 1 5782 1 1 1 1 43 ARG . B . 43 ARG c 1 5782 1 1 1 1 44 ILE . B . 44 ILE e 1 5782 1 1 1 1 45 GLU . B . 45 GLU h 1 5782 1 1 1 1 46 LYS . B . 46 LYS i 1 5782 1 1 1 1 47 VAL . B . 47 VAL a 1 5782 1 1 1 1 48 GLU . B . 48 GLU c 1 5782 1 1 1 1 49 HIS . B . 49 HIS d 1 5782 1 1 1 1 50 SER . B . 50 SER d 1 5782 1 1 1 1 51 ASP . B . 51 ASP d 1 5782 1 1 1 1 52 LEU . B . 52 LEU d 1 5782 1 1 1 1 53 SER . B . 53 SER d 1 5782 1 1 1 1 54 PHE . B . 54 PHE d 1 5782 1 1 1 1 55 SER . B . 55 SER f 1 5782 1 1 1 1 56 LYS . B . 56 LYS k 1 5782 1 1 1 1 57 ASP . B . 57 ASP o 1 5782 1 1 1 1 58 TRP . B . 58 TRP p 1 5782 1 1 1 1 59 SER . B . 59 SER a 1 5782 1 1 1 1 60 PHE . B . 60 PHE c 1 5782 1 1 1 1 61 TYR . B . 61 TYR d 1 5782 1 1 1 1 62 LEU . B . 62 LEU d 1 5782 1 1 1 1 63 LEU . B . 63 LEU d 1 5782 1 1 1 1 64 TYR . B . 64 TYR d 1 5782 1 1 1 1 65 TYR . B . 65 TYR d 1 5782 1 1 1 1 66 THR . B . 66 THR d 1 5782 1 1 1 1 67 GLU . B . 67 GLU d 1 5782 1 1 1 1 68 PHE . B . 68 PHE d 1 5782 1 1 1 1 69 THR . B . 69 THR d 1 5782 1 1 1 1 70 PRO . B . 70 PRO d 1 5782 1 1 1 1 71 THR . B . 71 THR f 1 5782 1 1 1 1 72 GLU . B . 72 GLU k 1 5782 1 1 1 1 73 LYS . B . 73 LYS b 1 5782 1 1 1 1 74 ASP . B . 74 ASP c 1 5782 1 1 1 1 75 GLU . B . 75 GLU c 1 5782 1 1 1 1 76 TYR . B . 76 TYR d 1 5782 1 1 1 1 77 ALA . B . 77 ALA d 1 5782 1 1 1 1 78 CYS . B . 78 CYS d 1 5782 1 1 1 1 79 ARG . B . 79 ARG d 1 5782 1 1 1 1 80 VAL . B . 80 VAL d 1 5782 1 1 1 1 81 ASN . B . 81 ASN d 1 5782 1 1 1 1 82 HIS . B . 82 HIS f 1 5782 1 1 1 1 83 VAL . B . 83 VAL k 1 5782 1 1 1 1 84 THR . B . 84 THR l 1 5782 1 1 1 1 85 LEU . B . 85 LEU m 1 5782 1 1 1 1 86 SER . B . 86 SER b 1 5782 1 1 1 1 87 GLN . B . 87 GLN d 1 5782 1 1 1 1 88 PRO . B . 88 PRO c 1 5782 1 1 1 1 89 LYS . B . 89 LYS d 1 5782 1 1 1 1 90 ILE . B . 90 ILE d 1 5782 1 1 1 1 91 VAL . B . 91 VAL d 1 5782 1 1 1 1 92 LYS . B . 92 LYS d 1 5782 1 1 1 1 93 TRP . B . 93 TRP d 1 5782 1 1 1 1 94 ASP . B . 94 ASP f 1 5782 1 1 1 1 95 ARG . B . 95 ARG k 1 5782 1 1 1 1 96 ASP . B . 96 ASP . 1 5782 1 1 1 1 97 MET . B . 97 MET . 1 5782 1 stop_ save_ save_PB_annotation_2 _PB_list.Sf_category PB_list _PB_list.ID 2 _PB_list.Query_ID db3bzf_8933#D _PB_list.Queried_date 2015-01-13 _PB_list.Input_file_name pdb3bzf.ent _PB_list.Output_file_name bmr5782_3bzf_PB.str _PB_list.Electronic_address http://bmrbpub.protein.osaka-u.ac.jp/archive/pb/bmr5782_3bzf_PB.str _PB_list.AA_seq_one_letter_code RTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM _PB_list.PB_seq_code zzcdddddfbdcdehiacddddddehiacfbdcddddeehiacehiadddddddfkopacddddddddddfkbccddddddfkbfbacdddddfkzz _PB_list.PDB_ID 3BZF _PB_list.PDBX_exptl_method "X-RAY DIFFRACTION" _PB_list.PDBX_refine_ls_R_factor_R_free 0.26936 _PB_list.PDBX_refine_ls_R_factor_R_work 0.20018 _PB_list.PDBX_refine_ls_d_res_high 2.50 _PB_list.PDBX_refine_ls_d_res_low 29.60 _PB_list.Entry_ID 5782 loop_ _PB_char.Entity_assembly_ID _PB_char.Assembly_ID _PB_char.Entity_ID _PB_char.Comp_index_ID _PB_char.Comp_ID _PB_char.PDB_model_num _PB_char.PDB_strand_ID _PB_char.PDB_ins_code _PB_char.PDB_residue_no _PB_char.PDB_residue_name _PB_char.PB_code _PB_char.Align _PB_char.Entry_ID _PB_char.PB_list_ID 1 1 1 1 MET . D . 1 ARG . 0 5782 2 1 1 1 2 THR . D . 2 THR . 0 5782 2 1 1 1 3 PRO . D . 3 PRO c 0 5782 2 1 1 1 4 LYS . D . 4 LYS d 1 5782 2 1 1 1 5 ILE . D . 5 ILE d 1 5782 2 1 1 1 6 GLN . D . 6 GLN d 1 5782 2 1 1 1 7 VAL . D . 7 VAL d 1 5782 2 1 1 1 8 TYR . D . 8 TYR d 1 5782 2 1 1 1 9 SER . D . 9 SER f 1 5782 2 1 1 1 10 ARG . D . 10 ARG b 1 5782 2 1 1 1 11 HIS . D . 11 HIS d 1 5782 2 1 1 1 12 PRO . D . 12 PRO c 1 5782 2 1 1 1 13 ALA . D . 13 ALA d 1 5782 2 1 1 1 14 GLU . D . 14 GLU e 1 5782 2 1 1 1 15 ASN . D . 15 ASN h 1 5782 2 1 1 1 16 GLY . D . 16 GLY i 1 5782 2 1 1 1 17 LYS . D . 17 LYS a 1 5782 2 1 1 1 18 SER . D . 18 SER c 1 5782 2 1 1 1 19 ASN . D . 19 ASN d 1 5782 2 1 1 1 20 PHE . D . 20 PHE d 1 5782 2 1 1 1 21 LEU . D . 21 LEU d 1 5782 2 1 1 1 22 ASN . D . 22 ASN d 1 5782 2 1 1 1 23 CYS . D . 23 CYS d 1 5782 2 1 1 1 24 TYR . D . 24 TYR d 1 5782 2 1 1 1 25 VAL . D . 25 VAL e 1 5782 2 1 1 1 26 SER . D . 26 SER h 1 5782 2 1 1 1 27 GLY . D . 27 GLY i 1 5782 2 1 1 1 28 PHE . D . 28 PHE a 1 5782 2 1 1 1 29 HIS . D . 29 HIS c 1 5782 2 1 1 1 30 PRO . D . 30 PRO f 1 5782 2 1 1 1 31 SER . D . 31 SER b 1 5782 2 1 1 1 32 ASP . D . 32 ASP d 1 5782 2 1 1 1 33 ILE . D . 33 ILE c 1 5782 2 1 1 1 34 GLU . D . 34 GLU d 1 5782 2 1 1 1 35 VAL . D . 35 VAL d 1 5782 2 1 1 1 36 ASP . D . 36 ASP d 1 5782 2 1 1 1 37 LEU . D . 37 LEU d 1 5782 2 1 1 1 38 LEU . D . 38 LEU e 1 5782 2 1 1 1 39 LYS . D . 39 LYS e 1 5782 2 1 1 1 40 ASN . D . 40 ASN h 1 5782 2 1 1 1 41 GLY . D . 41 GLY i 1 5782 2 1 1 1 42 GLU . D . 42 GLU a 1 5782 2 1 1 1 43 ARG . D . 43 ARG c 1 5782 2 1 1 1 44 ILE . D . 44 ILE e 1 5782 2 1 1 1 45 GLU . D . 45 GLU h 1 5782 2 1 1 1 46 LYS . D . 46 LYS i 1 5782 2 1 1 1 47 VAL . D . 47 VAL a 1 5782 2 1 1 1 48 GLU . D . 48 GLU d 1 5782 2 1 1 1 49 HIS . D . 49 HIS d 1 5782 2 1 1 1 50 SER . D . 50 SER d 1 5782 2 1 1 1 51 ASP . D . 51 ASP d 1 5782 2 1 1 1 52 LEU . D . 52 LEU d 1 5782 2 1 1 1 53 SER . D . 53 SER d 1 5782 2 1 1 1 54 PHE . D . 54 PHE d 1 5782 2 1 1 1 55 SER . D . 55 SER f 1 5782 2 1 1 1 56 LYS . D . 56 LYS k 1 5782 2 1 1 1 57 ASP . D . 57 ASP o 1 5782 2 1 1 1 58 TRP . D . 58 TRP p 1 5782 2 1 1 1 59 SER . D . 59 SER a 1 5782 2 1 1 1 60 PHE . D . 60 PHE c 1 5782 2 1 1 1 61 TYR . D . 61 TYR d 1 5782 2 1 1 1 62 LEU . D . 62 LEU d 1 5782 2 1 1 1 63 LEU . D . 63 LEU d 1 5782 2 1 1 1 64 TYR . D . 64 TYR d 1 5782 2 1 1 1 65 TYR . D . 65 TYR d 1 5782 2 1 1 1 66 THR . D . 66 THR d 1 5782 2 1 1 1 67 GLU . D . 67 GLU d 1 5782 2 1 1 1 68 PHE . D . 68 PHE d 1 5782 2 1 1 1 69 THR . D . 69 THR d 1 5782 2 1 1 1 70 PRO . D . 70 PRO d 1 5782 2 1 1 1 71 THR . D . 71 THR f 1 5782 2 1 1 1 72 GLU . D . 72 GLU k 1 5782 2 1 1 1 73 LYS . D . 73 LYS b 1 5782 2 1 1 1 74 ASP . D . 74 ASP c 1 5782 2 1 1 1 75 GLU . D . 75 GLU c 1 5782 2 1 1 1 76 TYR . D . 76 TYR d 1 5782 2 1 1 1 77 ALA . D . 77 ALA d 1 5782 2 1 1 1 78 CYS . D . 78 CYS d 1 5782 2 1 1 1 79 ARG . D . 79 ARG d 1 5782 2 1 1 1 80 VAL . D . 80 VAL d 1 5782 2 1 1 1 81 ASN . D . 81 ASN d 1 5782 2 1 1 1 82 HIS . D . 82 HIS f 1 5782 2 1 1 1 83 VAL . D . 83 VAL k 1 5782 2 1 1 1 84 THR . D . 84 THR b 1 5782 2 1 1 1 85 LEU . D . 85 LEU f 1 5782 2 1 1 1 86 SER . D . 86 SER b 1 5782 2 1 1 1 87 GLN . D . 87 GLN a 1 5782 2 1 1 1 88 PRO . D . 88 PRO c 1 5782 2 1 1 1 89 LYS . D . 89 LYS d 1 5782 2 1 1 1 90 ILE . D . 90 ILE d 1 5782 2 1 1 1 91 VAL . D . 91 VAL d 1 5782 2 1 1 1 92 LYS . D . 92 LYS d 1 5782 2 1 1 1 93 TRP . D . 93 TRP d 1 5782 2 1 1 1 94 ASP . D . 94 ASP f 1 5782 2 1 1 1 95 ARG . D . 95 ARG k 1 5782 2 1 1 1 96 ASP . D . 96 ASP . 1 5782 2 1 1 1 97 MET . D . 97 MET . 1 5782 2 stop_ save_